- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'Moocci.CG.ELv1_2.S55...' >
- Transcript 'Haaura.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S505.g05448.01.t
Possible name(s)
GAA; MGAM; SI
Gene model
Location
S505 [23,837 / 27,450]
Amino acid sequence
Length: 737
>Haaura.CG.MTP2014.S505.g05448.01.p
MLRIIILAAICIYRTNAYSAATCPSTIAETDRVDCHSSSGANQADCFDAGCMWCETSDSN
NPNNYPWCFYDSPTIPEEGECTSCTCTSKVDCYPQSGSSEGGCLGRGCIWCPSNIQGVPW
CIMGSGGGVSPDSSMCTGIQESQRLDCYPESGASEQGCYSRECIWCESNTPDIPWCFYNT
TDSSEIPDGGGNTGNSGSCPTTISENSRIDCWPGGGATSGGCVTAECIWCESNTEGVPWC
FFNTTGLSPGIEDSERINCIPEGGFNLTACKERGCQYASVDSSAAPMCYFSSDYGYVMVG
DPIETQTGYLINLQRVSSGTLFGDDVNSLTLTFDFDSDHRLHWKFFDDSNGRFEVPLTIN
GAATKTAANPLYHVTFSNAPTFSFKIIRKSSGAVLWDTSLGGLTFSNQFLQIATRIPEGT
SVYGFGETEHSTLLHKFDWSAWGMYARDQPPAGVGNLYGVFPFYVAIEQDANSHGVLLLN
SNAQDITFTPAPGLLYRTIGGVLDFYMFLGPEPNTVIEQYSLAIGPSFFPPYWSLGFQLC
RYGYGDLATVQETVDQMNTYGIPQDVQYGDIDYMDDGRDFTYSLTNYDGLPDYVRELQSE
GKHYIIILDDPQGAYPPYERGIAKDVYVKTADGEDLTGKVWPPGKSVFPDYSNPDTVDWW
SNECKLFHEVIPFDGLWIDMNEPANFGTGSTDGCKVNSLNNPPYHPLIWGDVLADKTICP
DAMHSMGTHYDTHSLYG
Nucleotide sequence
Length: 2,211
>Haaura.CG.MTP2014.S505.g05448.01.t
ATGTTAAGGATTATCATTCTCGCAGCTATCTGTATTTACAGGACAAACGCATACTCTGCT
GCAACATGCCCTTCTACGATAGCAGAGACAGACCGCGTGGATTGTCACTCGTCATCAGGC
GCAAACCAAGCAGATTGCTTTGACGCAGGATGCATGTGGTGCGAAACTAGCGACTCCAAC
AATCCGAATAATTATCCTTGGTGTTTTTACGATAGTCCAACAATTCCAGAGGAGGGAGAA
TGTACGTCTTGCACTTGCACTAGTAAAGTGGACTGCTATCCACAATCTGGTTCAAGTGAG
GGAGGATGCCTTGGCAGAGGTTGCATATGGTGCCCTAGTAATATCCAAGGAGTTCCGTGG
TGTATCATGGGATCCGGAGGAGGCGTTAGTCCTGACTCTAGCATGTGTACTGGGATACAA
GAGAGTCAACGACTCGATTGTTACCCTGAATCCGGTGCTAGTGAACAGGGATGTTACTCG
AGAGAATGCATTTGGTGTGAATCAAATACTCCTGATATACCGTGGTGCTTTTACAATACT
ACTGACTCAAGTGAAATACCAGATGGCGGAGGGAATACTGGAAATAGCGGGAGTTGTCCT
ACCACCATTTCGGAAAATTCTCGAATAGACTGTTGGCCAGGTGGTGGTGCCACCTCGGGC
GGTTGCGTGACTGCAGAATGCATATGGTGTGAAAGTAATACAGAAGGCGTCCCGTGGTGC
TTTTTCAATACTACGGGCCTCTCTCCTGGAATTGAAGACAGCGAGAGGATCAATTGCATA
CCTGAGGGAGGGTTCAATCTAACTGCATGCAAAGAAAGAGGATGTCAATATGCATCCGTA
GATTCTTCAGCAGCACCGATGTGCTACTTCTCGAGCGATTACGGTTATGTCATGGTTGGC
GATCCAATAGAAACACAGACGGGTTATTTAATCAACTTGCAAAGAGTGTCATCTGGTACT
CTTTTCGGCGACGATGTTAATTCGTTAACATTGACGTTTGACTTTGATTCAGATCACAGA
TTACATTGGAAATTCTTTGACGATTCCAACGGACGATTTGAAGTCCCGCTCACAATAAAT
GGAGCAGCAACTAAAACAGCAGCAAATCCCTTGTACCATGTGACCTTCAGCAATGCTCCA
ACTTTCTCCTTCAAGATTATTCGTAAATCAAGCGGGGCTGTGCTGTGGGATACTTCTTTA
GGTGGACTGACGTTTAGCAACCAATTCTTGCAAATAGCCACTAGGATTCCAGAGGGAACA
TCAGTCTATGGATTTGGAGAAACGGAGCACTCCACTCTACTGCATAAGTTTGATTGGAGC
GCTTGGGGTATGTATGCGAGGGATCAACCACCTGCGGGAGTAGGAAATTTGTACGGCGTT
TTCCCCTTCTATGTCGCTATTGAGCAAGATGCAAATTCTCATGGAGTTCTACTACTGAAT
TCCAATGCACAAGATATAACATTCACGCCGGCACCCGGACTTTTATACCGTACGATAGGC
GGAGTCCTGGATTTCTACATGTTTCTTGGTCCCGAACCAAACACGGTCATCGAGCAATAC
AGTTTGGCTATTGGTCCTTCTTTTTTCCCTCCGTATTGGTCACTTGGTTTTCAGCTATGT
CGCTACGGGTACGGTGATTTGGCAACCGTTCAAGAGACAGTCGATCAAATGAATACCTAC
GGAATACCACAGGATGTGCAATATGGCGACATCGATTACATGGATGATGGACGCGACTTC
ACTTACAGTCTAACCAACTACGATGGACTTCCGGATTACGTCAGAGAACTCCAGTCAGAA
GGAAAACACTACATTATAATTCTAGACGATCCACAAGGAGCTTACCCACCATACGAACGA
GGAATTGCTAAAGATGTCTACGTTAAAACAGCTGATGGTGAAGATCTCACAGGAAAGGTA
TGGCCACCAGGCAAAAGCGTCTTCCCCGACTATTCAAATCCAGACACTGTGGATTGGTGG
TCAAACGAATGTAAGCTATTCCACGAAGTAATACCTTTCGACGGGCTCTGGATTGACATG
AACGAACCAGCTAATTTCGGCACTGGTAGTACCGATGGTTGCAAAGTAAACAGTTTAAAC
AATCCACCTTACCATCCCTTGATTTGGGGAGATGTGCTGGCCGATAAAACAATATGCCCC
GACGCTATGCATTCGATGGGCACGCACTATGATACACACAGTCTTTACGGG
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[21-72] 13.54 - T[79-125] 11.372 - T[134-180] 14.582 - T[197-244] 12.642 - T[245-292] 11.18 |
| SMART |
P_trefoil_dom (IPR000519) - T[21-75] 0.098 - T[84-128] 0.0085 - T[134-183] 8.7E-8 - T[197-247] 0.0079 - T[250-295] 0.052 |
| Pfam |
P_trefoil_dom (IPR000519) - T[27-70] 4.9E-8 - T[81-121] 2.4E-5 - T[136-179] 5.2E-10 - T[202-243] 6.4E-8 - T[252-290] 2.3E-7 |
| CDD |
P_trefoil_dom (IPR000519) - T[27-70] 0.00264837 - T[89-121] 4.22928E-4 - T[141-180] 8.842E-6 - T[205-244] 6.99189E-4 |
| SUPERFAMILY |
Gal_mutarotase_sf_dom (IPR011013) - T[271-513] 5.96E-35 |
| Pfam |
Gal_mutarotase_N (IPR031727) - T[311-417] 3.4E-28 |
| Pfam |
Glyco_hydro_31 (IPR000322) - T[506-737] 3.3E-52 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[516-683] 1.23E-27 - T[718-736] 1.23E-27 |
| ProSitePatterns |
Glyco_hydro_31_AS (IPR030458) - T[675-682] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MGA_HUMAN | 42.6 % | 423 | 8.07E-130 |
| SUIS_HUMAN | 43.32 % | 397 | 1.09E-120 |
| LYAG_HUMAN | 39.6 % | 386 | 2.16E-121 |