- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R49....' >
- Clone 'cien85722' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S49.g01209.02.t
Possible name(s)
BBS4; OGT; TTC8
Gene model
Location
S49 [100,636 / 104,960]
Amino acid sequence
Length: 589
>Haaura.CG.MTP2014.S49.g01209.02.p
RNSSVRLDNHIFSVILCLLIMSKQEDVTASIESAEGNLVHDEQETVKIKAPKPRPRTKKP
ADLPVVERRNWLIHQHYVRKEFNSCKQVIQEQLVETSGQCEYALYIQAMISKYEGKIAES
TELLQICATINPHNANILKQIARNLFLIGKYKNAIECYNRAAELSAEPDWEISHHLGICF
LHLKQYETAEQNLSDALERSKHDVTFSALARLYLETSRIDKAVNILKSGIDFSPENIELL
NMLGLLYLRMENFHRAFELLGQAMTFDPENYKAILAAGSLMQVHGDFDVALTKYRVAAQK
CPESAALWNNIAMCFFGKKKYVAAISCLKRATYLAPFDWRILYNLSLLHLTMQQYASAFQ
FACTALKLKPKSGSLFMLLAVALKNLGDIQNTKRSYEQAMELQPNNMLIMVNYAAFLHEQ
KDTKGAVKLFKQLERMNKESNDLESDKEVLEMIKKLGAALHMGDKFVSSLDEAEKLKKSS
KEKKKKRLDSKQNILEENSGVESKKKESSSVASPTPSKTSSHELPSPLGAAPNALSRSTL
PPVGGSSLPPLKKRQPHEDSMSRIEKLIEQLPDPSKHSLEKSPQPMAE*
Nucleotide sequence
Length: 1,767
>Haaura.CG.MTP2014.S49.g01209.02.t
AGGAATTCATCTGTCAGATTAGATAATCATATATTTAGTGTAATTCTGTGCCTCCTCATA
ATGTCCAAACAAGAAGATGTGACTGCTTCCATAGAGTCAGCGGAGGGAAATCTAGTGCAC
GATGAACAAGAAACTGTGAAAATTAAAGCACCAAAGCCAAGACCTCGTACAAAAAAGCCT
GCTGACCTGCCTGTGGTTGAACGAAGAAATTGGCTCATACATCAGCACTACGTCCGTAAA
GAATTTAATTCTTGCAAGCAAGTCATACAAGAGCAGCTTGTTGAAACCAGTGGACAGTGC
GAATACGCTCTCTACATTCAAGCGATGATATCCAAATACGAAGGAAAGATTGCCGAGTCG
ACAGAGTTGCTGCAAATCTGTGCGACTATAAATCCTCATAATGCCAATATCTTGAAGCAG
ATTGCTAGAAATCTATTTCTCATTGGAAAGTACAAAAATGCTATAGAATGCTATAACCGT
GCTGCAGAGTTGTCTGCAGAACCAGACTGGGAAATTTCTCACCACCTTGGCATATGCTTT
CTCCATTTGAAGCAGTATGAAACGGCAGAACAGAATTTGTCTGACGCTTTGGAGAGAAGT
AAGCATGACGTAACGTTTTCCGCCTTGGCTCGTCTCTATCTCGAAACCAGCAGGATCGAC
AAAGCCGTAAATATTCTTAAAAGCGGCATTGATTTCTCACCTGAAAACATAGAGCTACTG
AACATGTTGGGGCTGTTGTATTTGCGAATGGAAAATTTCCACAGGGCATTCGAACTTCTC
GGGCAGGCTATGACATTTGACCCTGAAAATTATAAGGCAATTCTTGCTGCTGGCTCTCTC
ATGCAAGTTCATGGGGACTTCGACGTGGCTCTGACAAAGTATCGTGTTGCCGCTCAAAAA
TGTCCAGAGAGTGCAGCGCTGTGGAACAATATAGCTATGTGCTTCTTTGGTAAAAAGAAA
TACGTTGCTGCAATAAGCTGCTTGAAGAGAGCCACCTATCTCGCTCCTTTTGACTGGCGT
ATTCTTTACAATTTGAGTCTCCTCCATCTGACGATGCAGCAGTATGCAAGTGCATTTCAG
TTTGCTTGTACGGCTCTCAAATTAAAACCAAAATCTGGATCTCTTTTTATGTTGCTAGCA
GTTGCTCTAAAAAATCTTGGAGACATCCAGAATACGAAAAGGTCATATGAACAGGCGATG
GAATTGCAGCCAAACAACATGCTCATTATGGTAAACTATGCAGCTTTCTTGCATGAGCAA
AAAGATACTAAGGGAGCTGTGAAGCTTTTCAAACAGCTTGAAAGAATGAACAAAGAAAGT
AATGATCTGGAATCTGACAAAGAGGTATTAGAAATGATTAAAAAACTTGGCGCTGCTCTG
CACATGGGAGACAAGTTTGTATCCTCTCTAGATGAAGCAGAAAAGCTGAAAAAATCTTCA
AAAGAAAAAAAGAAAAAACGTTTAGATTCGAAACAAAACATTTTAGAGGAAAATAGCGGT
GTTGAGTCAAAGAAAAAGGAATCTTCATCAGTCGCATCACCTACTCCAAGTAAAACTTCT
TCTCACGAACTACCTTCTCCTTTGGGTGCAGCACCTAATGCTTTATCGAGATCAACATTA
CCTCCAGTAGGTGGTAGCAGCCTTCCACCTCTGAAAAAGCGTCAGCCGCATGAGGATAGT
ATGAGCAGGATAGAAAAACTCATCGAGCAACTTCCTGATCCATCAAAACATTCATTGGAA
AAATCGCCGCAGCCTATGGCCGAGTGA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[79-205] 6.8E-18 - T[206-278] 7.5E-11 - T[279-479] 6.4E-31 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[93-203] 1.15E-13 - T[206-432] 4.93E-32 |
| SMART |
TPR_repeat (IPR019734) - T[101-134] 82.0 - T[135-168] 0.043 - T[170-203] 1.7 - T[204-236] 140.0 - T[237-270] 0.014 - T[305-338] 0.0016 - T[339-372] 5.9 - T[373-406] 0.04 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[101-440] 51.502 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[135-168] 8.378 - T[203-236] 8.526 - T[237-270] 11.21 - T[271-304] 6.49 - T[305-338] 7.641 - T[339-372] 7.582 - T[373-406] 9.057 - T[407-440] 5.163 |
| Pfam |
TPR_repeat (IPR019734) - T[141-166] 0.033 - T[238-270] 0.015 - T[306-337] 0.0043 - T[340-371] 0.0084 - T[376-406] 0.0028 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TTC8_HUMAN | 28.804 % | 81.3 | 4.14E-16 |
| BBS4_HUMAN | 56.835 % | 492 | 6.07E-170 |