- Clone 'cieg011g07' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S495.g05380.02.t
Possible name(s)
GRWD1; RBBP4; RBBP7
Gene model
Location
S495 [36,388 / 37,579]
Amino acid sequence
Length: 397
>Haaura.CG.MTP2014.S495.g05380.02.p
SKIESTDYKIWKKNTPFLYDFLVTHSLEWPSLTVEWLPDLTRPETKDFSVHRLILGTHTT
EEQNHLIILDVPFPSPHAEFDATSYDSEKDEFGGYVAKSGKIETEIKINHDGEVNRARHM
PQIPCVIATKPPSSDVLVFDYTKHPSKPDASGKCNPDLRLKGHQKEGYGLSWNPNSTGLL
LSSSNDHTVCMWDVNGATKDNKNLTALNTFKGHTDIVEDVCWHCLHDSLFASVSDDRKLM
VWDSRSNSTEQPIHAIVAHGAEVNCVSFNPYNEYILATGSSDRTVNLWDLRKLDSNLHTF
RNHDDEVFQVHWSPHRENILASGSSDQKLNVWDVKRINKQGSEFKEKSSELLFSHRGHSA
KISDFSWNCNQPWTICSVGEDNIMQMWTIASNICKDD
Nucleotide sequence
Length: 1,191
>Haaura.CG.MTP2014.S495.g05380.02.t
TCCAAAATTGAGAGTACAGACTATAAAATATGGAAGAAAAACACGCCTTTCCTCTACGAC
TTTTTAGTGACTCATTCCTTAGAGTGGCCGAGCCTAACAGTTGAGTGGTTACCAGATCTT
ACCCGACCCGAAACCAAAGACTTTTCTGTTCATCGTCTTATACTTGGAACTCACACAACA
GAAGAGCAAAATCACTTGATCATCTTGGATGTTCCATTTCCGAGCCCGCATGCTGAATTC
GATGCAACCAGTTACGACAGCGAAAAGGATGAGTTCGGTGGATACGTCGCCAAGAGCGGT
AAGATCGAAACAGAAATCAAAATAAATCACGACGGCGAAGTCAACCGTGCCCGACACATG
CCTCAGATACCATGCGTCATTGCCACCAAACCACCTTCAAGCGACGTCTTGGTATTTGAT
TATACAAAACACCCCAGTAAGCCAGATGCGAGCGGTAAATGCAACCCGGATCTACGATTG
AAAGGCCACCAGAAAGAAGGTTATGGACTGTCATGGAATCCGAACAGCACCGGACTATTG
CTGAGTTCTTCTAATGACCATACTGTATGCATGTGGGACGTCAACGGTGCCACTAAAGAT
AACAAGAACTTAACAGCCTTGAACACTTTTAAAGGTCACACTGATATAGTTGAAGATGTG
TGCTGGCATTGTCTCCATGATAGCTTGTTTGCCTCTGTCTCAGACGATCGCAAGTTGATG
GTTTGGGATTCCAGATCAAATTCTACCGAGCAACCGATTCACGCGATTGTAGCTCACGGT
GCAGAAGTGAACTGTGTCTCTTTCAACCCATACAATGAATATATCCTTGCTACCGGGTCT
TCGGATAGAACTGTAAATCTTTGGGATTTACGCAAGCTTGATTCGAATCTACATACATTT
AGAAATCATGATGACGAAGTATTCCAAGTTCATTGGTCTCCGCACAGAGAAAATATTTTG
GCCTCGGGTAGCAGTGATCAAAAATTGAACGTATGGGACGTCAAAAGAATAAATAAACAA
GGCAGTGAGTTCAAAGAGAAGTCTTCAGAACTCCTCTTTTCGCACAGAGGTCATTCCGCA
AAAATATCAGATTTTTCATGGAATTGTAATCAACCGTGGACGATATGCTCTGTTGGTGAA
GATAATATCATGCAGATGTGGACCATAGCCAGCAACATTTGTAAAGATGAT
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-397] 2.0E-143 |
| Pfam |
Histone-bd_RBBP4_N (IPR022052) - T[8-74] 3.5E-25 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[99-387] 5.64E-52 |
| SMART |
WD40_repeat (IPR001680) - T[153-193] 3.1E-6 - T[203-243] 6.3E-7 - T[249-289] 7.7E-10 - T[293-333] 7.9E-8 - T[348-388] 0.011 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[160-202] 11.778 - T[210-252] 10.241 - T[256-291] 13.683 - T[300-335] 13.516 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[160-397] 35.752 |
| Pfam |
WD40_repeat (IPR001680) - T[160-193] 0.025 - T[207-243] 5.7E-4 - T[251-289] 1.7E-7 - T[295-333] 4.2E-4 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[180-194] . - T[276-290] . - T[320-334] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[180-194] 1.1E-8 - T[276-290] 1.1E-8 - T[320-334] 1.1E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRWD1_HUMAN | 26.984 % | 105 | 6.47E-25 |
| RBBP7_HUMAN | 63.819 % | 556 | 0 |
| RBBP4_HUMAN | 66.08 % | 577 | 0 |