- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C2.226.v1....' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S4944.g10822.01.t
Possible name(s)
GAR1
Gene model
Location
S4944 [911 / 1,493]
Amino acid sequence
Length: 194
>Haaura.CG.MTP2014.S4944.g10822.01.p
MSFRGGRGRGGRGGFRGGRGGFRGGRGGGNFNRYNDEPPDCVVQLGTVMHPCQDELVCKC
TNEKIPYFNAPLYLENKSRIGKVDEIFGQIREFCFSVKLSDNMKAESFSKDTKFFIDPMK
LLPLQRFLPQPPGSIKKGGRGRGRGGARGGRGGFGGRGGFGGRGGSRGGFRGGSRGGFRG
GRGGGGGRGFRGR*
Nucleotide sequence
Length: 582
>Haaura.CG.MTP2014.S4944.g10822.01.t
ATGTCATTTCGTGGAGGAAGGGGGCGCGGTGGACGCGGTGGATTTCGAGGAGGTCGTGGT
GGGTTCCGAGGCGGACGGGGAGGTGGAAATTTCAATCGTTACAACGACGAACCTCCGGAT
TGTGTTGTACAACTTGGCACTGTAATGCATCCGTGTCAAGACGAGCTGGTTTGCAAATGC
ACCAATGAAAAAATTCCATACTTCAATGCCCCACTCTATTTAGAAAACAAATCTCGTATC
GGCAAAGTGGATGAAATATTTGGGCAAATAAGAGAATTTTGCTTCTCTGTGAAGCTTTCA
GATAATATGAAAGCAGAATCATTTTCAAAGGATACCAAATTTTTCATAGACCCGATGAAA
CTCTTACCACTTCAGAGATTTCTCCCACAACCACCTGGCTCGATTAAAAAAGGTGGCAGA
GGAAGGGGTCGAGGCGGTGCAAGAGGAGGACGTGGTGGATTTGGAGGACGTGGTGGATTC
GGAGGAAGAGGAGGCAGCAGAGGAGGATTTAGAGGTGGAAGCAGAGGAGGATTTAGAGGT
GGCAGAGGAGGAGGAGGCGGGAGAGGTTTCAGGGGTCGCTGA
| PANTHER |
H/ACA_rnp_Gar1 (IPR021154) - T[1-189] 2.8E-61 |
| Pfam |
H/ACA_rnp_Gar1/Naf1 (IPR007504) - T[27-128] 1.5E-36 |
| Gene3D |
Gar1/Naf1_Cbf5-bd_sf (IPR038664) - T[38-129] 5.8E-43 |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[43-117] 2.97E-17 |
| ProDom |
H/ACA_rnp_Gar1 (IPR021154) - T[45-120] 1.0E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GAR1_HUMAN | 70.707 % | 153 | 4.87E-47 |