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TRANSCRIPT CARD

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  1. Clone 'cima872939' > 
  2. Transcript 'KH2012:KH.S612.3.v1....' > 
  3. Clone 'cien221441' > 
  4. Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S4920.g10811.01.t

Possible name(s)

PBX1; PBX2; PBX3

Gene model

Haaura.CG.MTP2014.S4920.g10811

Location

S4920 [2,412 / 3,843]

Sequences

Amino acid sequence

Length: 188

>Haaura.CG.MTP2014.S4920.g10811.01.p
SVLSMRSPPEDDVTDPQQLRLDRMLESEGVSGPEGTGSAAAVAAAASSGGNDSAEHSDYR
AKLAQIRQIYHSELEKYNQACNEFTTHVMNLLREQSRTRPISNKEIQRMIGIITKKFNNI
QLQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAR
KCSITVSQ

Nucleotide sequence

Length: 564

>Haaura.CG.MTP2014.S4920.g10811.01.t
TCAGTTCTGAGCATGAGATCACCTCCTGAAGATGATGTTACTGATCCACAGCAGCTGAGA
CTTGATAGAATGTTAGAATCTGAGGGAGTGTCTGGTCCCGAAGGCACGGGTTCTGCGGCA
GCAGTTGCAGCAGCGGCATCGAGCGGCGGCAATGACAGTGCGGAACACAGCGATTACAGA
GCGAAACTTGCTCAAATCAGACAAATATATCATTCTGAACTTGAGAAATACAATCAGGCA
TGCAATGAATTCACAACGCATGTGATGAACTTACTGAGAGAGCAGAGTAGAACTCGTCCA
ATATCTAACAAAGAAATTCAGAGAATGATCGGGATTATAACGAAGAAGTTCAATAACATT
CAGCTTCAACTGAAACAAAGTACATGTGAAGCTGTTATGATATTGAGATCAAGATTCTTG
GATGCAAGACGTAAACGGCGCAACTTCAGCAAGCAGGCTACAGAGGTTCTGAACGAATAT
TTTTATTCTCATCTGAGCAATCCATACCCAAGTGAAGAAGCCAAGGAAGAACTGGCAAGA
AAATGTAGCATAACTGTGTCACAG

InterProScan

Pfam
PBX (IPR005542) - T[2-141] 1.5E-61
ProSiteProfiles
Homeobox_dom (IPR001356) - T[140-188] 10.074
SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[142-188] 9.84E-11
Pfam
Homeobox_dom (IPR001356) - T[143-188] 1.0E-9
CDD
Homeobox_dom (IPR001356) - T[143-188] 5.83501E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PBX1_HUMAN 75.521 % 288 1.55E-97
PBX2_HUMAN 75.393 % 282 6.46E-95
PBX3_HUMAN 78.836 % 291 1.74E-98