- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S487.g05342.01.t
Possible name(s)
SNX13; SNX14; SNX25
Gene model
Location
S487 [17,524 / 31,372]
Amino acid sequence
Length: 982
>Haaura.CG.MTP2014.S487.g05342.01.p
FVQKKQSWSLFWSGVTLSLVVATFGLVGLICFLISIICFVGGIVSMLNQHCKHDLEVRLH
CMALEMNQLPHPGIPIILDAEYSHRNFSADMKLTSSASIDARLKECLDYLMRDYVKYWYN
DLSDDAEFLHSLQMTLNEVVRVLATRAKNIDWQTYITTNLVDDFASHVRLYRKAEEKIKK
IQANDSASDSQDNISVSSNSAVKPSNNNEKSKVSTQSIVDLFFECEINVEKSVCREQVSC
DKEKQISFFQDISEVLLYLLLPKADLHCRPLKALLKEVMVLGIFMPLLKLYSDPDYLNQY
LNWLISDNCLTSEAFLVMTRHSSEVGELQAMRDLADEEIARTRARDDVGDDPAVKQQLSS
MEYVRSLCENRINKLQRGEMDYEQEPTIDSLMADKSAKLYNLPLSATLRNNIALQFFIDY
MQSVDGQAYLFFWLTVDGYRASAEQQLNALKMQQLSGQTKGTPDMEMLRVIGRNIYEQYL
SKNANPRVELDPATDKEILRRLNNEEPSPNVFDELQKKVFQTMQRDEKLYPAFKSSSLYV
KLLAELDLLREPSIQSEDTNGSVSSSSMDDLSVEPEESSKFSAIITQTGVCTEHGKSYAL
FAISVARYWTTNDGKVRHEKWDTFRRFSEFIDLHQSLKENGSNLGTIRLPSKTIFKDLNX
XXXXXXXXXLNQYLKIILSMDHPQRSLESVHTFLDAKAYQKNNKTLKKKMDTVMRNVRNV
RNFVLQAPDSLLDGIHKASDKVSGGIQRISKSRNGGTDGSLDDEGLLYDDCRVSEQIETN
IEGNIPLRIVLLLMDEIFDLKHRNQWLRRQIVAALQQLVRAVFGDRMNRKIVEYVDHAVA
ADQVAEYICRFQESFWPNGTLADKQLKRETESRMRTRGLTKSKLLGAIPDELRPLVGTET
SRRGVMRVFELLQHPELNSRLFIVLLEGVLQRLFPSNRFQELFKKFHSKSPKMRARHRER
MCRALPTRRRSTITKNQRFKR*
Nucleotide sequence
Length: 2,946
>Haaura.CG.MTP2014.S487.g05342.01.t
TTTGTTCAGAAAAAGCAGTCATGGAGCTTGTTCTGGTCTGGAGTTACTCTTTCTTTAGTT
GTTGCAACGTTTGGTCTCGTTGGTTTAATCTGTTTTTTGATCAGCATAATATGTTTTGTT
GGAGGCATCGTGTCGATGTTGAATCAGCACTGTAAACATGACCTGGAAGTACGACTTCAC
TGTATGGCATTAGAAATGAACCAATTACCTCATCCTGGAATACCAATAATTCTCGATGCT
GAGTACTCTCATAGAAATTTCTCCGCCGACATGAAGTTAACAAGCTCAGCAAGTATAGAT
GCCAGATTAAAGGAGTGCTTAGATTATTTAATGCGCGACTATGTGAAATACTGGTACAAT
GACTTGTCGGATGATGCCGAATTTCTTCACTCATTGCAAATGACATTAAATGAGGTTGTG
CGAGTATTAGCTACAAGAGCGAAAAATATTGATTGGCAGACTTACATCACTACAAACCTA
GTCGATGACTTTGCCTCTCATGTTCGTCTCTATCGCAAGGCTGAGGAAAAAATCAAAAAA
ATTCAGGCAAATGACTCTGCGAGCGACAGTCAAGATAATATATCTGTATCTTCAAACAGT
GCAGTAAAACCATCTAATAACAATGAAAAATCAAAGGTATCTACTCAGAGCATTGTTGAC
TTGTTTTTCGAATGCGAGATCAATGTTGAGAAGTCGGTATGTCGTGAACAGGTGTCGTGC
GATAAAGAGAAACAAATTTCTTTTTTTCAGGATATTTCTGAAGTTTTACTATATCTCTTA
CTACCGAAAGCAGATCTGCACTGTCGGCCGTTAAAAGCTTTGCTCAAGGAAGTAATGGTG
CTTGGTATCTTCATGCCTCTACTAAAACTCTATAGTGATCCAGACTACCTCAATCAATAT
CTCAACTGGCTGATTTCTGATAACTGTCTCACAAGTGAAGCATTTCTCGTCATGACAAGA
CACAGTTCAGAGGTCGGCGAACTGCAGGCAATGCGTGATTTAGCAGATGAAGAAATCGCA
AGAACACGTGCAAGAGATGATGTCGGAGACGACCCTGCAGTGAAGCAACAGCTGAGCAGT
ATGGAATATGTGAGAAGCCTATGCGAGAACAGGATTAACAAACTTCAGCGGGGAGAAATG
GATTATGAGCAAGAACCAACCATCGATTCTCTGATGGCAGATAAATCCGCAAAACTTTAT
AACCTTCCGTTGAGCGCAACGCTACGAAACAACATCGCGCTGCAGTTTTTTATAGACTAT
ATGCAGTCAGTGGATGGGCAGGCCTATCTGTTCTTCTGGTTAACAGTTGATGGTTACCGT
GCTTCTGCAGAACAACAGCTGAACGCTTTAAAAATGCAACAGTTGTCTGGTCAAACAAAG
GGTACACCAGACATGGAGATGTTGAGAGTAATAGGAAGAAATATATATGAACAATACTTA
AGTAAAAATGCTAATCCAAGGGTGGAATTAGATCCGGCAACGGACAAAGAAATATTGCGC
CGACTTAACAATGAAGAACCTTCACCGAATGTATTTGATGAATTACAAAAGAAGGTTTTT
CAAACGATGCAACGAGACGAAAAACTCTATCCCGCATTCAAATCAAGTTCGCTGTATGTA
AAGCTTCTGGCAGAGCTCGACTTGCTTCGCGAACCAAGCATACAGTCCGAAGATACCAAC
GGATCCGTTTCTAGTTCTTCCATGGACGATTTGAGTGTTGAACCGGAGGAAAGCAGTAAA
TTTTCAGCTATCATTACACAAACTGGTGTATGCACTGAACACGGCAAGTCATACGCCCTT
TTTGCCATAAGTGTCGCAAGATATTGGACCACGAACGATGGCAAAGTGCGGCATGAAAAG
TGGGATACCTTCAGAAGATTTAGTGAATTTATTGACCTTCACCAGAGTCTCAAGGAAAAT
GGTAGCAACTTAGGAACGATTCGTCTTCCCAGCAAAACAATATTTAAGGATTTAAATGAN
NNNNNNNNNNNNNNNNNNNNNNNNNNCCTAAATCAGTACTTGAAGATTATCCTATCGATG
GACCATCCGCAACGATCCCTGGAGAGCGTTCATACATTTCTAGATGCCAAAGCATACCAA
AAGAACAATAAAACACTAAAAAAGAAGATGGACACAGTGATGAGGAATGTACGGAATGTA
CGTAATTTTGTTCTACAAGCCCCCGATTCTCTTCTCGATGGAATCCATAAAGCTTCTGAT
AAAGTTTCCGGTGGAATACAGAGGATATCAAAGAGTAGGAATGGGGGAACAGACGGGAGT
CTCGATGATGAAGGATTGTTGTATGACGATTGCAGAGTTTCAGAACAAATCGAAACAAAT
ATTGAAGGAAATATACCTCTCAGAATTGTACTCCTACTCATGGATGAAATATTCGACTTG
AAACATCGGAACCAATGGCTTCGTAGACAGATAGTAGCCGCTTTACAGCAACTGGTTCGT
GCCGTTTTCGGTGACCGGATGAATCGAAAAATCGTTGAGTATGTCGATCATGCGGTTGCA
GCTGATCAGGTTGCAGAATATATATGCAGATTTCAAGAATCTTTCTGGCCCAATGGAACT
CTTGCAGACAAACAACTGAAGAGAGAAACAGAAAGTCGCATGAGGACTAGGGGTTTGACG
AAATCAAAACTTCTTGGTGCTATTCCAGATGAACTACGACCTCTAGTCGGCACGGAAACC
TCAAGGAGAGGGGTGATGCGTGTTTTCGAATTGTTGCAACACCCTGAGCTTAATTCTCGG
TTATTCATAGTATTACTCGAAGGAGTGTTGCAGCGTCTTTTTCCTTCGAACAGGTTCCAA
GAACTTTTCAAAAAATTCCATTCCAAATCTCCTAAAATGAGAGCGAGACACAGGGAGAGA
ATGTGTCGGGCTTTACCAACAAGACGGCGGTCGACAATCACAAAAAATCAGCGTTTCAAG
AGATAG
| SMART |
Phox_assoc (IPR003114) - T[96-309] 2.9E-25 |
| ProSiteProfiles |
Phox_assoc (IPR003114) - T[96-309] 45.567 |
| Pfam |
Phox_assoc (IPR003114) - T[97-304] 1.9E-38 |
| SUPERFAMILY |
RGS_sf (IPR036305) - T[397-546] 8.11E-24 |
| SMART |
RGS (IPR016137) - T[403-543] 1.2E-24 |
| ProSiteProfiles |
RGS (IPR016137) - T[403-526] 15.069 |
| Pfam |
RGS (IPR016137) - T[406-541] 2.4E-17 |
| CDD |
SNX13_RGS (IPR037896) - T[408-541] 1.03575E-61 |
| Gene3D |
PX_dom_sf (IPR036871) - T[576-710] 4.0E-15 |
| ProSiteProfiles |
Phox (IPR001683) - T[579-701] 10.827 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[580-697] 7.19E-14 |
| Pfam |
Phox (IPR001683) - T[587-695] 3.2E-10 |
| Pfam |
Sorting_nexin_C (IPR013937) - T[806-915] 2.4E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX13_HUMAN | 39.261 % | 684 | 0 |
| SNX25_HUMAN | 23.177 % | 122 | 3.41E-28 |
