Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S481.g05310.01.t

Possible name(s)

VPS29

Gene model

Haaura.CG.MTP2014.S481.g05310

Location

S481 [26,827 / 28,049]

Sequences

Amino acid sequence

Length: 185

>Haaura.CG.MTP2014.S481.g05310.01.p
MVLVLVTGDMHIPHRSCGLSPKFKKLLVPGKIQHILCTGNLCNKESYDYLKTLASDVHVV
RGDFDDISNNYPEQKVVTVGQFRVGLVHGHQIVPWGDSESLAMLQRQLDVDILIFGHTHK
FEAYEQENKFYINPGSITGSFSPLTSEVIPSFVLMDIQSNTVVTYVYQLENGKDVKVERI
EFKK*

Nucleotide sequence

Length: 555

>Haaura.CG.MTP2014.S481.g05310.01.t
ATGGTTCTCGTACTTGTTACTGGCGATATGCATATTCCTCATCGCTCATGTGGTCTATCT
CCAAAATTCAAGAAACTTCTGGTCCCTGGAAAAATCCAACACATTCTTTGCACGGGGAAT
TTATGCAACAAGGAATCGTATGATTATCTCAAAACGCTCGCCAGTGACGTACACGTAGTT
CGTGGCGATTTTGATGACATTTCGAATAATTATCCGGAACAAAAAGTTGTTACAGTTGGA
CAATTTCGAGTTGGATTAGTTCATGGCCACCAGATCGTGCCGTGGGGAGATTCTGAGAGT
CTGGCCATGTTGCAGCGACAACTTGATGTGGACATCCTCATCTTTGGCCATACTCATAAA
TTCGAAGCCTATGAGCAAGAAAATAAATTTTACATAAATCCAGGAAGTATCACAGGCTCT
TTCTCTCCACTGACAAGCGAAGTGATTCCGTCCTTTGTTCTGATGGATATTCAGTCCAAT
ACTGTAGTAACCTATGTCTATCAACTCGAAAATGGAAAAGATGTCAAAGTGGAGAGAATA
GAATTCAAAAAGTGA

InterProScan

Gene3D	Metallo-depent_PP-like (IPR029052) - T[1-184] 2.0E-79
PANTHER	Vps29 (IPR028661) - T[1-184] 3.4E-83
PANTHER	Phosphodiesterase_MJ0936/Vps29 (IPR000979) - T[1-184] 3.4E-83
TIGRFAM	Phosphodiesterase_MJ0936/Vps29 (IPR000979) - T[3-157] 6.5E-33
CDD	Vps29 (IPR028661) - T[3-182] 4.135E-122
Pfam	Calcineurin-like_PHP_lpxH (IPR024654) - T[4-159] 6.5E-22

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VPS29_HUMAN	77.049 %	295	9.35E-104