- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S471.g05242.01.t
Possible name(s)
CELF3; CELF4; CELF5
Gene model
Location
S471 [21,109 / 32,191]
Amino acid sequence
Length: 599
>Haaura.CG.MTP2014.S471.g05242.01.p
MVMAMHGATQVLQHTLTSGGGIGGCGAPSTSMGFQVINGVVPMATNTTHIPMDASLLPFG
TGFVQPNPPTSTHYITTTQAQPQLCSTPSNVSMKEFQDKDDDAVKLFIGQVPKNWTEHEL
RPIFEPYGEIYELSVLHDKYTGMHKGCAFLTYCKKTSAINAQNILHEQKTLPGMNHPMQV
KPADTVNKGEDRKLFVGMLGKRQTEEDIRQLFEKFGHIEECTILRTPDGQSKGCSFVKLS
TSTGARAAIDTLHGSQTMPGASSSIVVKLADTDKERAIRKMQQMAQNYGLVSPVTLQLGP
YGSPLPQMAQHPVMATTPGVMPTAAGWSPLATAFGTATQLGQMTTNLGQASAIMQATNGH
GAQMAGIPSTPQSPVASITTLNLVQPPMASQSGMTTPQEAIYPLQAYPGTRLAAPVVTTT
HSMTPSLAVHNGTSSDPSPRMTLCASQTPPTMEMIQAPAYAQPYTVVYVPPGQYAPVPQQ
LTPTHLTPIATTQGAPALVNSPTAPQKEGPEGCNLFIYHLPQEFTDADLANVFQPFGNVI
SAKVFIDRATNQSKCFGFVSYDNPVSAQTAIQTMNGFQIGMKRLKVQLKRPKEQSRPY*
Nucleotide sequence
Length: 1,797
>Haaura.CG.MTP2014.S471.g05242.01.t
ATGGTGATGGCAATGCATGGTGCTACTCAAGTCTTACAACACACGCTGACATCCGGTGGC
GGGATCGGAGGTTGCGGCGCTCCATCCACCAGTATGGGCTTCCAGGTCATCAACGGGGTT
GTCCCGATGGCAACCAACACCACCCATATTCCGATGGACGCATCTTTGCTTCCCTTTGGC
ACAGGATTTGTGCAACCGAATCCTCCAACATCTACTCACTATATCACGACTACACAAGCA
CAACCACAACTGTGTAGTACACCTTCAAATGTTAGCATGAAAGAATTCCAAGATAAAGAT
GATGACGCAGTGAAGCTATTCATTGGACAGGTTCCTAAGAATTGGACAGAGCACGAACTG
AGACCTATTTTTGAACCTTATGGAGAAATCTATGAATTGTCCGTGCTACATGATAAATAC
ACAGGAATGCATAAAGGTTGCGCTTTTCTTACATACTGCAAGAAAACTTCGGCCATAAAT
GCACAAAACATCCTGCATGAACAGAAGACTTTACCTGGTATGAACCATCCAATGCAAGTA
AAACCTGCAGACACAGTCAACAAAGGCGAAGATCGCAAATTATTTGTCGGAATGCTGGGA
AAAAGACAGACAGAGGAAGACATCCGACAGCTGTTCGAAAAATTTGGACACATTGAGGAG
TGCACTATTTTAAGAACTCCTGACGGGCAGAGTAAGGGTTGCTCATTCGTGAAATTGTCG
ACGAGCACAGGGGCTCGTGCGGCCATTGATACATTGCATGGAAGTCAGACAATGCCGGGA
GCTTCATCCAGCATTGTAGTCAAGCTAGCTGACACAGACAAGGAACGAGCGATTCGTAAA
ATGCAACAGATGGCACAGAACTATGGTCTTGTTAGCCCAGTAACGCTTCAACTTGGTCCG
TATGGATCCCCTCTTCCCCAGATGGCACAGCATCCAGTCATGGCCACAACGCCAGGTGTC
ATGCCTACAGCGGCGGGTTGGTCTCCCCTCGCAACAGCTTTCGGCACTGCAACACAACTC
GGACAAATGACAACGAATCTTGGGCAGGCATCAGCTATCATGCAAGCCACCAACGGTCAT
GGAGCCCAGATGGCAGGAATCCCAAGTACTCCACAAAGCCCAGTTGCATCCATCACGACC
CTTAATCTGGTCCAGCCACCGATGGCTTCACAGTCGGGAATGACCACCCCACAAGAAGCA
ATTTACCCATTGCAAGCTTACCCAGGTACAAGGCTTGCTGCCCCCGTGGTTACGACGACC
CATAGCATGACCCCTAGTCTTGCTGTTCATAATGGCACCAGTTCTGACCCGAGTCCCCGA
ATGACGTTATGTGCATCTCAAACTCCACCGACTATGGAAATGATCCAAGCTCCTGCTTAC
GCCCAACCATATACAGTTGTCTATGTACCACCTGGACAATATGCTCCAGTCCCACAGCAA
CTTACACCGACCCACCTCACCCCAATTGCAACGACACAAGGAGCCCCTGCTCTTGTAAAC
AGCCCCACGGCTCCCCAGAAAGAAGGTCCGGAAGGCTGCAACCTATTTATATATCACCTT
CCACAAGAGTTCACTGACGCGGATCTTGCAAACGTCTTTCAACCTTTTGGAAATGTTATT
TCAGCTAAAGTCTTCATTGATCGTGCAACAAATCAAAGTAAATGCTTTGGATTTGTGAGC
TACGACAACCCTGTCAGTGCACAAACAGCGATTCAAACCATGAATGGATTCCAGATTGGG
ATGAAACGTCTCAAAGTACAGCTGAAACGTCCAAAGGAGCAAAGCAGACCTTACTAA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[79-185] 5.51E-21 - T[190-282] 2.66E-42 - T[510-594] 2.66E-42 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[90-188] 7.3E-23 - T[189-279] 5.3E-25 - T[482-590] 6.0E-29 |
| CDD |
CELF3/4/5/6_RRM1 (IPR034648) - T[99-185] 3.30145E-60 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[104-185] 14.112 - T[192-272] 15.988 - T[513-591] 16.995 |
| PRINTS |
Hud_Sxl_RNA (IPR002343) - T[104-119] 6.1E-5 - T[197-212] 6.1E-5 - T[212-224] 6.1E-5 - T[253-270] 6.1E-5 |
| SMART |
RRM_dom (IPR000504) - T[105-181] 1.6E-18 - T[193-268] 5.6E-17 - T[514-587] 1.6E-23 |
| Pfam |
RRM_dom (IPR000504) - T[106-172] 5.9E-13 - T[194-256] 4.3E-15 - T[515-585] 1.0E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELF5_HUMAN | 48.718 % | 441 | 3.41E-150 |
| CELF3_HUMAN | 48.56 % | 455 | 8.01E-156 |
| CELF4_HUMAN | 55.311 % | 306 | 8.86E-98 |
