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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C3.582.v1....' > 
  2. Region 'REG00001553' > 
  3. Transcript 'KH2012:KH.C1.1088.v1...' > 
  4. Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S45.g01141.01.t

Possible name(s)

RAB7A; RAB9A; RAB9B

Gene model

Haaura.CG.MTP2014.S45.g01141

Location

S45 [103,171 / 106,727]

Sequences

Amino acid sequence

Length: 226

>Haaura.CG.MTP2014.S45.g01141.01.p
CQNTFDKFVSFWKKQVIMASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGA
DFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTMPNTFKTLDSWR
DEFLIQASPRDPENFPFVVIGNKIDLENRAVSHKRAQGWCHSKNDIPYFECSAKENINVE
QAFQTVAKQALLQESDVELYQSDFPDRIDLKGSSEAKPKSGDCAC*

Nucleotide sequence

Length: 678

>Haaura.CG.MTP2014.S45.g01141.01.t
TGCCAGAACACCTTTGACAAATTCGTATCGTTTTGGAAAAAGCAAGTCATCATGGCATCA
AGAAAGAAGGTGCTTTTGAAAGTAATAATATTAGGAGATAGCGGAGTTGGGAAAACCTCT
CTCATGAATCAGTATGTCAATAAAAAGTTTAGCAATCAGTATAAAGCGACTATAGGTGCT
GATTTTCTTACCAAGGAAGTAATGGTGGATGACAGACTAGTTACAATGCAGATTTGGGAT
ACAGCGGGCCAAGAACGATTTCAATCTCTCGGCGTAGCTTTCTACAGAGGAGCGGACTGT
TGCGTCCTAGTTTATGATGTTACGATGCCGAACACCTTCAAAACGCTCGACAGTTGGAGG
GATGAATTCCTTATTCAAGCATCGCCACGAGATCCTGAGAACTTTCCCTTTGTTGTCATC
GGCAATAAAATTGATTTGGAGAACAGGGCTGTCTCACACAAGAGAGCTCAGGGATGGTGC
CACAGCAAAAACGACATTCCATACTTTGAATGTTCTGCTAAAGAAAACATCAATGTCGAG
CAAGCCTTCCAGACCGTAGCTAAACAGGCCCTGCTGCAAGAATCTGATGTTGAGCTCTAT
CAGTCAGACTTTCCCGATCGCATCGATTTGAAAGGCAGTTCGGAAGCTAAGCCTAAATCT
GGTGATTGTGCGTGCTAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[22-196] 3.2E-55
Pfam
Small_GTPase (IPR001806) - T[27-190] 2.2E-58
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[27-187] 9.5E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAB9A_HUMAN 48.78 % 201 8.49E-66
RAB9B_HUMAN 51.269 % 207 6.02E-68
RAB7A_HUMAN 83.173 % 362 5.43E-129