Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S4579.g10711.01.t

Possible name(s)

CUL9; RNF144A; RNF144B

Gene model

Haaura.CG.MTP2014.S4579.g10711

Location

S4579 [254 / 4,541]

Sequences

Amino acid sequence

Length: 294

>Haaura.CG.MTP2014.S4579.g10711.01.p
KSFLGIIFYVSEEVASDPLRTFCPNVHCSSVCHVCLKHEQTNSHKKKKKKKQEGSVKAGQ
PVSVACQTVSSAIVACYCHLVIIITDLCMHSLIKFVFQCYMTFCNICKAEWTEEHKCTDI
NSSISNDLTRLQARSGLSLTGKPDALIKRCPVCNVLIEKDRGCAQMICKNCTHVFCWYCL
KLLDKDFMLRHYDEGPCRKFLGHSRAQVFRHRLGVVGLFTAFSLLLVVASPILLLTAPVF
LCCKCKICCQRAMHQARQHNNNTIFNESFPENRRTNEKENPPQAVVETTSQEHS

Nucleotide sequence

Length: 882

>Haaura.CG.MTP2014.S4579.g10711.01.t
AAGAGCTTCCTCGGAATTATATTTTATGTGTCAGAAGAAGTTGCAAGTGATCCTCTTCGC
ACTTTCTGTCCGAACGTCCATTGTTCGTCTGTATGTCATGTCTGTTTAAAACATGAACAG
ACAAACAGTCACAAAAAGAAGAAAAAGAAAAAGCAAGAAGGTTCAGTGAAAGCTGGACAA
CCAGTCAGTGTCGCCTGTCAAACTGTGAGCTCCGCCATTGTTGCTTGCTACTGCCATCTC
GTGATTATCATTACAGATCTTTGCATGCATTCACTCATCAAGTTTGTTTTTCAGTGTTAC
ATGACTTTCTGCAATATATGCAAAGCCGAGTGGACAGAAGAGCACAAGTGCACCGACATT
AATTCATCAATTAGCAATGACTTGACGAGATTGCAAGCTAGGTCAGGGTTATCTTTGACA
GGCAAACCAGATGCCTTAATCAAACGATGTCCAGTATGCAATGTACTTATTGAAAAAGAT
CGTGGCTGTGCCCAGATGATCTGCAAAAACTGTACACATGTGTTCTGTTGGTACTGTTTG
AAGTTACTTGATAAAGATTTCATGCTGCGACATTACGACGAAGGGCCGTGCAGAAAGTTT
CTAGGTCACAGCAGAGCACAAGTATTCAGACATCGGCTTGGTGTTGTAGGACTTTTCACC
GCCTTCTCTCTTCTCCTTGTTGTCGCTTCTCCTATTCTTCTCCTCACTGCTCCTGTGTTT
CTTTGTTGCAAATGCAAGATCTGTTGTCAGAGAGCAATGCATCAAGCGCGCCAGCACAAC
AACAATACAATATTTAACGAAAGCTTCCCAGAGAACAGGAGAACAAACGAAAAAGAAAAT
CCACCACAAGCAGTAGTTGAAACAACGTCACAAGAGCACAGC

InterProScan

PANTHER	E3_UB_ligase_RBR (IPR031127) - T[11-245] 1.1E-56
Pfam	IBR_dom (IPR002867) - T[145-181] 4.4E-8
ProSitePatterns	Znf_RING_CS (IPR017907) - T[171-180] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
R144A_HUMAN	41.277 %	170	2.1E-51
R144B_HUMAN	38.136 %	158	1.27E-46