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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S449.g05129.01.t

Possible name(s)

CACNA2D1; CACNA2D3; CACNA2D4

Location

S449 [14,938 / 20,998]

Sequences

Amino acid sequence

Length: 463

>Haaura.CG.MTP2014.S449.g05129.01.p
QYNDSANYVEECFNGTLVRADNTNKERIKDALRHRNTSGVANLDLALQLSFEVMKRFDYA
NSSSECYSSIMIITDGSTDIQQEVMNSYMKGTKRQVRIFSYLIGADKTYMKPVKDLACNN
YGYFQQVESRNGVSEKVLHYLTVMNRPQAFLGDNHQVWTKPYYETTNQDLGFGLITTIAT
SVFGTMSKLPRLLGVAATDIPIDQMLDTISIHKSGVNSYFFIVTNNGYVAAHPRLVTLYR
TRYQNVWKPKPNYNSIDIENLETAFKLDESFRDRLLQGKKKRAEAKNVIHPVENWSRSLN
YNGTYYFAPIRGTPFSLGMFEPTAYGKLEIIYNETLKYIQYGATYKDAECDQVNKELMKT
YHEPIEPLNQVSAICSLKFSDVRVSEKWKYCQFKTNTGLTASYEKKMSQLDMIKAFFLKE
NRNIECDEELIISVLFDVYVTALLPSGWSELKTFRNLTKDLW*

Nucleotide sequence

Length: 2,649

>Haaura.CG.MTP2014.S449.g05129.01.t
CAGTACAACGATTCTGCTAACTACGTTGAGGAATGCTTTAATGGAACACTCGTGCGAGCA
GACAACACTAACAAGGAGAGAATCAAGGATGCCCTACGTCACCGTAACACATCGGGCGTC
GCGAATTTAGATTTAGCGTTGCAGTTGTCATTTGAAGTAATGAAGCGGTTCGACTACGCG
AATTCAAGTAGCGAATGTTACTCGTCCATTATGATCATAACTGATGGCTCTACTGACATC
CAGCAGGAAGTGATGAATAGTTACATGAAAGGGACAAAAAGACAGGTTCGCATATTTTCG
TACCTTATTGGCGCCGATAAAACGTATATGAAGCCCGTGAAAGATTTGGCTTGCAATAAC
TACGGATATTTTCAGCAAGTTGAAAGCAGAAACGGAGTTTCGGAGAAAGTGTTGCACTAT
CTTACTGTCATGAACAGACCACAAGCATTTCTTGGAGATAATCACCAAGTGTGGACGAAA
CCCTACTACGAAACAACAAATCAAGATTTGGGATTCGGACTGATCACAACAATTGCAACA
TCGGTTTTCGGAACTATGTCAAAACTACCAAGATTGCTCGGAGTGGCCGCGACCGATATC
CCAATCGATCAAATGTTAGATACGATATCGATTCACAAGTCAGGCGTGAATTCCTATTTC
TTCATCGTAACTAACAACGGATATGTTGCAGCACACCCTCGACTTGTCACGTTATACAGG
ACACGTTACCAGAACGTGTGGAAGCCTAAGCCCAATTATAACAGTATTGACATTGAAAAC
TTGGAAACAGCATTTAAACTGGATGAGAGTTTTCGAGATCGACTACTACAGGGGAAAAAG
AAGAGAGCAGAGGCAAAAAACGTCATACATCCCGTGGAAAATTGGTCAAGATCGTTGAAC
TACAACGGAACCTATTACTTTGCACCGATAAGAGGGACGCCATTCAGCTTAGGGATGTTT
GAACCCACGGCTTACGGAAAGCTTGAAATCATTTACAACGAGACGTTGAAATATATTCAG
TATGGTGCGACTTACAAAGATGCAGAATGCGACCAGGTAAACAAAGAACTTATGAAAACT
TACCATGAACCGATCGAACCACTGAATCAAGTTTCTGCTATATGCTCCTTGAAGTTTAGC
GATGTCAGAGTTTCTGAAAAATGGAAATATTGTCAGTTCAAGACCAACACCGGGTTGACG
GCTTCATATGAAAAGAAAATGTCACAGTTAGACATGATCAAAGCCTTTTTCCTCAAAGAA
AATAGGAATATTGAATGCGATGAAGAATTGATAATTAGCGTGCTCTTTGATGTCTACGTT
ACAGCGCTCTTACCTTCTGGGTGGTCTGAACTGAAAACATTTAGAAACCTAACAAAAGAT
CTTTGGTAAAAATTGTTTAATAGCAGGGTAGGCATTGAGATGACATTCATTATGACGAAA
AGCGGAGTAACGAGGCATTATTGGCATGAAGACTCGAGTTCATCCTATAATACAGTGCAA
TCTCTTCTAAAAAGCTTTGATCGGCAAAATTTTCCATCATTCTATCGCCGAACCGTGGCC
TACCCCGAACGCAACGCATGGATTTATTCTTTCATTAATGCTGATGACAGGTTGCAAAAG
TTTGATGCTTTATTGGCAACCAAAGCATTGTGGTATGATGGAGCTGCATTAGGTGTTATG
GGAACTGTCATAAAGACATCACATTTTACTCAAAAATTCTGGAACGATGCTGCTGGTGAT
TGTTCTCTGGATCCTTCTAGCATGTACAGCTGTTACATAATTGACAATAATGGATACATA
CTTCTCTCCAGTGAAGAGAACAATGATGTCGGTCAATTGATTGGAATAGTGGAGGGTCAG
GTCACGCGACATTTAATGTTAAATAAAGTGTTTTCCGTGGTGGAATTAATTGAATATGGT
ACGATGTGTGAGGAATCAAACAAAAATATGAATGGTGGAGCTAGGTCAACTTTACTTTTT
AGTCCATTCCTTTCTGTTCTCTCTTACCTTACATGGTGGACAAGAGAGTTCTCACTGGTA
CTAACCAATTTGCTTGCTTGGAATCTTTGGTCTTTGTTCCTTAACACTGAACAACCAGCT
GCAGCGTTTTCTGTTTTTGAAGAAAATGTTCTTCACTACAGAGTTTGTGACATGAAGTAT
AAACTTTTGGCAGTTGGCACATCAGCGTTACCATATCGTAACAAAACAGATTGTTCCGAT
GGTTGTTCGAGGGAAGTAGCGATTCATCAGATAAACAAAAGCAACCTCTACCTACTTGTG
TCTTTCTTAGCCACTACCTTACATGAACGAGATGAAGAGTGTTCCAGAATGAGGGATCAT
AAGTCTAAAAGAAAAGTGAAGCAATGCAAAAGTCATCATATAAGAAAAATGGAAGATGAA
GTTACACTCAATTGCTCATCTGATGGAGGAGTTTCCATGTTCTCTTCAGGATTCTGGGTC
AAAGTAAAAAGAACTAATAAAAACAATACAGGATCAAATTCCTATTTAGTATTGAGTCTT
TCCTGGTTTCAATTTAACAAAGTGGTTTCTGATGCTATGTGTCACAAGGCAAAAGCTTCA
AAGCAAATGTGCAGAGCATTACTGACTGGTGCCATGTGTGGAGTTGCGAAACAGTGCAAA
CATTATTAA

InterProScan

Gene3D
vWFA_dom_sf (IPR036465) - T[1-141] 5.7E-11
ProSiteProfiles
VWF_A (IPR002035) - T[1-141] 8.95
Pfam
VWF_A (IPR002035) - T[11-124] 8.6E-7
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[18-131] 1.07E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CA2D1_HUMAN 26.359 % 120 7.64E-29
CA2D4_HUMAN 31.579 % 233 1.95E-67
CA2D3_HUMAN 32.826 % 247 1.78E-72