- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S4367.g10638.01.t
Possible name(s)
FOXD1; FOXD2; FOXD4
Gene model
Location
S4367 [3,162 / 4,533]
Amino acid sequence
Length: 457
>Haaura.CG.MTP2014.S4367.g10638.01.p
MQAVTPPAFNYLTEELKERTSPVYSDSGISESSSYQGIPNPTLSFESPLLVSPIRPNQYQ
LPVPPAHHKGECPGYPFPLAVSTPAPAHLSRGRKSSKTRYHPYGHRQIEDKQIQPVLQQF
LPMENASLQMQMQKHQQVLQFKSQEKSHIEKKIGKKQESGEVKPPYSYIALITMAIVQSP
GKKLTLGEICEFIMKKFPYYKERFPAWQNSIRHNLSLNDCFIKVPRQTGVPGKGNYWTID
PEAEDMFENGSFLRRRKRFRRATTSIQEPIRHPAAQIDSFVPTLSNIQSPAGNYYHPHNY
AMYANQYALHTPIPTNPVPLYGTNSQQTYSNNMYVPQGMNACYNTLPYYENDNNQALVYR
DISSRNVTQVQTPAPYSHLNNIAAAPAKPPQRKTCFSIESLLGKDENSRNEGTRQLHQGS
KIPMAAYQQQATHINGYNMNYTQGELPNYGVYHYAN*
Nucleotide sequence
Length: 1,371
>Haaura.CG.MTP2014.S4367.g10638.01.t
ATGCAAGCAGTAACGCCACCAGCGTTCAATTATTTGACTGAAGAATTGAAAGAGAGAACA
TCTCCAGTATACTCCGACAGTGGAATCTCAGAATCTTCTTCCTACCAGGGAATACCCAAC
CCGACTCTCAGCTTCGAATCCCCACTGCTAGTAAGCCCAATACGTCCAAATCAATATCAG
TTGCCTGTTCCACCGGCACATCACAAAGGAGAATGTCCTGGATACCCATTCCCTTTGGCT
GTTTCCACACCAGCGCCTGCACATCTCTCAAGGGGCAGAAAGTCTTCTAAGACGCGTTAT
CATCCATACGGTCATAGACAAATTGAGGATAAACAAATTCAACCAGTTTTGCAACAGTTT
CTTCCGATGGAAAATGCGAGCTTACAGATGCAAATGCAAAAACACCAACAGGTTCTTCAA
TTCAAAAGCCAGGAAAAGAGCCACATAGAAAAGAAGATAGGCAAGAAACAAGAGTCCGGC
GAAGTTAAACCACCATATTCGTACATCGCACTGATCACGATGGCGATCGTGCAGTCCCCA
GGCAAGAAGCTTACCTTGGGAGAAATATGCGAATTCATTATGAAGAAATTTCCGTACTAC
AAAGAACGTTTTCCAGCATGGCAAAACTCTATCCGTCACAACCTTTCTTTGAATGACTGT
TTCATCAAAGTACCGAGACAAACAGGAGTTCCTGGCAAGGGAAATTACTGGACCATTGAC
CCAGAAGCTGAAGATATGTTCGAGAATGGTTCGTTTTTGAGGCGAAGAAAACGCTTCCGA
CGCGCTACGACCTCAATTCAGGAACCCATTCGACATCCTGCTGCCCAAATCGACTCATTC
GTTCCAACGCTAAGCAACATCCAATCACCAGCAGGCAATTATTATCACCCTCATAACTAC
GCAATGTATGCCAACCAGTATGCGCTTCATACTCCAATCCCGACTAATCCTGTTCCACTC
TACGGAACAAACAGTCAGCAAACGTATTCCAACAACATGTATGTACCGCAAGGAATGAAC
GCATGCTACAATACATTACCTTATTACGAAAACGACAATAACCAAGCCCTAGTATATCGG
GACATCTCTTCGAGAAACGTGACGCAAGTGCAAACACCAGCCCCTTACTCACACTTGAAC
AATATTGCTGCAGCGCCAGCAAAACCGCCTCAGCGTAAAACGTGCTTTTCCATTGAATCA
TTGCTCGGGAAGGATGAGAATAGTCGCAACGAAGGTACACGCCAACTCCACCAAGGATCC
AAAATACCCATGGCTGCTTACCAACAGCAAGCCACCCACATCAATGGTTACAACATGAAT
TATACTCAAGGAGAATTACCAAACTATGGAGTCTACCACTACGCAAACTAG
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[149-258] 2.3E-44 |
| SMART |
Fork_head_dom (IPR001766) - T[161-251] 1.0E-57 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[162-257] 2.81E-39 |
| CDD |
Fork_head_dom (IPR001766) - T[163-240] 1.78652E-48 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[163-176] . |
| PRINTS |
Fork_head_dom (IPR001766) - T[163-176] 1.4E-22 - T[184-201] 1.4E-22 - T[207-224] 1.4E-22 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[163-257] 39.024 |
| Pfam |
Fork_head_dom (IPR001766) - T[163-248] 1.4E-37 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[207-213] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXD4_HUMAN | 53.086 % | 179 | 3.26E-51 |
| FOXD1_HUMAN | 80 % | 170 | 7.23E-48 |
| FOXD2_HUMAN | 80 % | 170 | 1.43E-47 |
