- Transcript 'Cisavi.CG.ENS81.R14....' >
- Transcript 'Cisavi.CG.ENS81.R2.2...' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S42.g01095.01.t
Possible name(s)
TRIM2; TRIM3; TRIM71
Gene model
Location
S42 [62,982 / 72,534]
Amino acid sequence
Length: 899
>Haaura.CG.MTP2014.S42.g01095.01.p
MSPSRTRTPTEYNIFKENIRFAGQNKMANSLDLLTKINDEFLTCQICFETYTCPKSLNCQ
HTFCKKCLQAYLTPNASALLCPTCRCAQPLTNEGIDGLKDNFFISSMADMLKTVKEISSD
DKQGTSLLCDTCDDDNRKTATARCLDCTDFLCNECSTWHRRTKLTRGHKIVSLSEFESGI
HNKELKSRAKIYCMMSYGCLNTIDTERTDSRKPLPVLWRDYRWPAVKIHEGEAAKIYCES
CQCPICHECVESSHSCHKRRSLKEEIVSQSITIEKFLSSAKNKTEVLHTMQDSMQELKRL
KKQVKDQAELEINKTCERFISAVERRKQEMIDELHNLHMNEIKQINADDDSVEMQLSSLM
SCAEFSRKVLEYGTPKEVLGLNNQMTQILQQLLETHPAIKYNKEDHTDQIQFSFNSEDLM
GITPLFGRLETVKTPFPNSINTVLRDLDAFCTGDPSLTIVRNGINFQRLDSIETRLIKQI
GKQGTGDGDFESTPNLVVNSVGEIITSDIDACKIQIFDPHGHFKDSFKTEVNGKSLRPAG
IAVLHNDDIVVCCEDQVYIWTHEGKKVVGFGKGMFSNCNSIAVDKHNRLVITDIGKHCVT
IYKDDGTFIDQFGMAGTNSEGKLIEPRYVACDSQNNIIVSDSGDCNVKKFNSQGELLYTF
GGEGPERGQFQGPRGVSIDNEDNIIVADCWNHRVDMFTTEGTFIRHVATGVDGLHFPWSV
ALTKTGKLILSEDYSWSVKLFALPDYRKGSMSSADDVTSPTTILIPDLEQFAGQFDMSNI
LNSKLSWWLNSPGANDISKTLNVTSTHSSMASRKERTTRSKSLTSKISSSSDSDLTSPTM
SSIASPAPPPPTPMTTEMPNGNILSGNHNGIGKVGKGSFKGKQFYQYDNMNAPVVNGL*
Nucleotide sequence
Length: 2,697
>Haaura.CG.MTP2014.S42.g01095.01.t
ATGAGTCCCTCAAGAACAAGAACGCCGACTGAATATAACATATTCAAGGAGAACATCAGG
TTTGCGGGGCAAAACAAGATGGCCAATTCTCTTGACTTGCTGACGAAAATTAATGATGAA
TTCCTAACATGTCAAATATGTTTCGAAACGTACACTTGTCCAAAAAGTCTCAACTGTCAG
CACACCTTCTGCAAGAAATGTCTGCAAGCGTACCTAACCCCGAACGCGTCTGCCTTGCTC
TGTCCAACTTGTCGATGCGCCCAACCACTGACAAACGAAGGCATCGACGGACTAAAGGAC
AATTTTTTCATATCCAGCATGGCAGACATGCTGAAAACGGTAAAGGAAATAAGCAGTGAC
GACAAACAAGGCACTTCACTGCTGTGCGACACGTGTGATGACGACAATAGAAAGACCGCG
ACCGCGAGATGCCTGGACTGCACCGACTTCCTTTGCAACGAGTGTTCGACCTGGCATAGA
CGTACCAAATTGACCAGGGGGCATAAAATCGTTTCGCTGTCGGAATTCGAGTCCGGGATT
CACAACAAGGAGTTGAAGAGCCGGGCAAAGATCTATTGCATGATGAGCTATGGTTGTCTC
AATACAATAGATACCGAGCGTACCGATTCGAGGAAACCGCTACCGGTTCTATGGCGTGAT
TACCGGTGGCCGGCAGTTAAAATACATGAAGGCGAAGCGGCCAAAATCTACTGCGAGTCA
TGTCAGTGTCCCATATGCCACGAATGCGTGGAATCAAGTCATTCATGCCACAAAAGACGA
TCACTCAAGGAAGAAATCGTCAGTCAGAGCATAACGATCGAAAAGTTTCTTTCCTCTGCA
AAAAACAAAACCGAAGTATTGCACACTATGCAAGACAGCATGCAAGAACTAAAGAGACTG
AAAAAGCAAGTCAAAGATCAAGCTGAACTCGAGATTAACAAAACTTGCGAAAGGTTCATT
TCGGCAGTGGAACGAAGAAAGCAAGAAATGATAGACGAGCTGCACAACCTTCACATGAAC
GAGATCAAACAGATAAATGCAGACGACGACTCTGTTGAAATGCAACTGAGTTCTCTCATG
TCTTGCGCAGAATTTTCAAGAAAGGTGCTTGAATATGGAACACCCAAAGAAGTGCTGGGA
CTGAATAATCAAATGACACAAATTCTACAACAACTCCTTGAAACTCATCCAGCTATTAAG
TATAACAAGGAAGATCACACTGATCAGATTCAATTCTCCTTCAATTCTGAAGATTTGATG
GGAATAACACCGCTTTTCGGAAGGTTGGAAACTGTCAAAACGCCTTTCCCGAATTCTATC
AATACGGTACTAAGAGACCTAGATGCCTTCTGCACCGGAGATCCAAGTTTAACTATTGTC
AGAAATGGAATCAATTTTCAACGACTGGACTCGATCGAAACCCGGTTGATCAAGCAAATT
GGAAAACAGGGTACCGGTGACGGTGATTTTGAGTCTACTCCAAACTTGGTTGTAAATTCC
GTCGGAGAAATCATAACTTCAGACATTGATGCATGCAAAATACAGATTTTTGATCCGCAC
GGACATTTCAAGGATTCTTTCAAAACTGAGGTGAACGGGAAAAGTCTACGACCTGCAGGG
ATAGCTGTTTTACACAACGATGATATCGTGGTTTGTTGCGAGGATCAGGTCTACATTTGG
ACGCACGAGGGAAAGAAAGTGGTTGGGTTCGGAAAAGGAATGTTTTCCAATTGCAACAGC
ATAGCGGTAGACAAACACAACAGACTTGTGATCACAGATATTGGGAAGCATTGTGTTACT
ATCTACAAGGATGATGGCACTTTCATAGACCAATTTGGTATGGCCGGCACCAACAGTGAA
GGGAAGCTGATTGAACCCAGATATGTTGCATGCGATTCACAAAACAATATCATTGTTTCG
GATAGTGGAGACTGCAATGTCAAGAAATTCAATTCTCAGGGAGAGCTACTTTATACATTT
GGAGGAGAGGGTCCAGAACGAGGTCAGTTCCAGGGACCGAGAGGCGTCAGCATTGACAAT
GAGGATAATATTATTGTGGCAGACTGCTGGAATCATCGAGTGGACATGTTTACGACTGAG
GGAACGTTTATTCGGCATGTAGCGACAGGAGTTGACGGTCTTCATTTCCCATGGTCAGTA
GCTTTAACAAAAACTGGAAAACTAATCCTTTCGGAAGATTACAGTTGGTCAGTAAAACTG
TTCGCGCTGCCTGACTACCGTAAAGGATCAATGAGCTCTGCAGACGACGTAACCTCTCCC
ACAACCATCCTCATACCAGATCTGGAACAATTTGCAGGGCAGTTTGACATGTCGAATATA
CTCAACAGCAAATTGTCATGGTGGCTTAATTCTCCAGGAGCAAATGACATTTCTAAAACC
TTGAATGTAACAAGCACACACAGTTCAATGGCTTCAAGAAAAGAACGAACGACCAGAAGC
AAATCGTTAACCAGCAAGATATCATCATCAAGTGACAGCGACCTAACATCCCCGACCATG
TCATCTATCGCATCGCCAGCTCCTCCGCCTCCCACACCAATGACCACTGAAATGCCGAAC
GGAAACATCCTATCGGGAAACCACAACGGAATAGGAAAAGTTGGGAAAGGGTCGTTCAAA
GGAAAACAGTTTTATCAATACGACAATATGAATGCTCCGGTGGTAAATGGTTTATAA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[25-106] 1.6E-13 |
| Pfam |
Znf_RING (IPR001841) - T[43-85] 8.3E-7 |
| SMART |
Znf_RING (IPR001841) - T[44-84] 2.0E-6 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[44-85] 12.696 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[59-68] . |
| SMART |
Znf_B-box (IPR000315) - T[124-173] 1.0E-5 - T[221-262] 0.041 |
| Pfam |
Znf_B-box (IPR000315) - T[130-173] 1.7E-5 - T[228-261] 7.9E-6 |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[132-173] 9.143 - T[229-262] 9.3 |
| CDD |
Znf_B-box (IPR000315) - T[228-262] 9.85832E-7 |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[467-663] 5.2E-42 - T[664-749] 1.3E-19 |
| ProSiteProfiles |
NHL_repeat_subgr (IPR013017) - T[477-520] 7.155 - T[567-605] 9.375 - T[626-653] 10.054 - T[657-700] 14.022 - T[710-744] 5.757 |
| Pfam |
NHL_repeat (IPR001258) - T[670-694] 3.1E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LIN41_HUMAN | 21.997 % | 155 | 1.21E-38 |
| TRIM2_HUMAN | 31.183 % | 161 | 4.75E-41 |
| TRIM3_HUMAN | 32.014 % | 160 | 1.14E-40 |