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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S4280.g10612.02.t

Possible name(s)

Haaura.CG.MTP2014.S4280.g10612

Location

S4280 [519 / 3,633]

Sequences

Amino acid sequence

Length: 519

>Haaura.CG.MTP2014.S4280.g10612.02.p
MQNDKARKINTQLMISQCQIKIRMPHGSAIELENLITSSPVQPDDLKETANNDIKQKKYV
RAFLYYFSASKFYKEKYLGDDAAQGIKACVQAVEMFVEEMIKQDDGKKIVTDYIIPALKE
VTDDLSKIPNADPRYLIRLQAWCLQSIGLCYKHCEDFQQFADNVESAIELLKRILKEDAD
KYWVFGICLHSSGEAHEKLDQKGQAMDLYERAIEAKNDAHDWPSIQSKDDSKEMTQEKLR
ILVQFSEAKLGDARNLIKTSKFSDALDLLREIEPMLRDIEGKIKALLIKIECYMMMEKHH
KVVREMDELVRLMLSSKKSVDDVMKMAANEITAKLYISGFLLYFSACRLYKEKSAGNDAV
KGIEACVDAVQLFVEKMINQDKKMKKIVTDYIIPELEDVTDDLSEIPNSDQEVQVEQQAW
CLYRIALCFYYCQAYQRYAEFNESAIELMKKQLKEDAENYYMVGHCYNNVGHAYSCLNQK
EKSKEMYRKSLDVYNKATDWPNEERKKEDIKRTENKLRV

Nucleotide sequence

Length: 1,616

>Haaura.CG.MTP2014.S4280.g10612.02.t
ATGAATGAATCCAAGTTCCANTCCAGGAAGCTCTCGAACTTCTTGAGGGGGGGGGGGGGA
TGCAAAATGATAAAGCAAGGAAGATAAACACCCAACTTATGATATCACAATGTCAGATAA
AAATAAGAATGCCACATGGTAGCGCTATAGAGCTAGAAAATCTGATTACATCATCACCAG
TGCAACCAGACGACTTGAAGGAAACTGCAAATAACGACATCAAACAAAAGAAATATGTTC
GAGCATTTCTTTACTATTTCTCGGCGAGTAAATTTTACAAAGAAAAATATCTTGGTGATG
ATGCAGCGCAAGGTATCAAAGCATGTGTACAAGCTGTTGAGATGTTTGTGGAAGAAATGA
TCAAACAGGATGACGGGAAGAAGATTGTCACTGATTACATCATCCCAGCACTGAAGGAAG
TCACCGATGATCTGAGCAAAATCCCAAATGCGGATCCAAGATATCTAATCAGATTGCAAG
CCTGGTGTTTACAAAGCATTGGATTGTGCTACAAACATTGCGAAGATTTTCAACAATTTG
CAGATAATGTTGAATCTGCCATCGAGCTATTGAAAAGAATATTAAAGGAAGATGCCGATA
AATATTGGGTGTTTGGAATTTGTCTTCATAGTTCTGGTGAAGCTCATGAGAAATTGGATC
AAAAGGGGCAAGCAATGGATCTGTATGAAAGAGCTATCGAGGCAAAGAACGATGCACATG
ACTGGCCGAGTATTCAGAGTAAAGATGACAGTAAGGAGATGACGCAGGAAAAGCTGAGGA
TTTTAGTGCAATTTTCAGAAGCCAAGTTAGGTGATGCAAGGAACTTAATAAAGACATCCA
AGTTTTCTGACGCTCTGGATCTTCTTCGTGAAATCGAACCGATGCTCAGAGATATTGAAG
GGAAAATAAAAGCTCTGCTGATAAAGATAGAATGTTACATGATGATGGAAAAACATCATA
AGGTGGTCAGAGAGATGGATGAACTTGTTCGACTGATGCTTTCATCAAAGAAATCAGTCG
ATGATGTCATGAAAATGGCGGCAAATGAAATCACAGCGAAGCTGTACATAAGTGGATTTC
TCCTTTATTTCTCTGCATGCAGATTATACAAGGAGAAATCTGCTGGGAATGATGCAGTGA
AAGGTATCGAAGCATGCGTGGATGCTGTGCAACTGTTTGTGGAGAAAATGATCAATCAAG
ATAAAAAGATGAAAAAGATTGTCACTGATTACATCATCCCAGAACTAGAGGATGTCACAG
ATGATCTGAGCGAAATCCCAAATTCAGATCAAGAAGTTCAAGTTGAGCAACAGGCTTGGT
GTTTGTACAGAATTGCATTGTGTTTCTACTACTGCCAGGCTTATCAACGATATGCCGAGT
TTAATGAATCTGCAATTGAACTGATGAAGAAACAATTGAAGGAAGATGCTGAGAACTATT
ACATGGTTGGACATTGCTACAATAATGTTGGTCATGCTTACTCATGCTTAAATCAAAAAG
AAAAATCGAAAGAAATGTACAGAAAATCACTGGATGTTTACAACAAAGCAACTGACTGGC
CTAATGAGGAAAGAAAGAAGGAAGATATCAAGCGAACAGAAAATAAGCTGAGAGTT

InterProScan

SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[36-78] 4.55E-8 - T[128-216] 4.55E-8 - T[417-495] 4.55E-7
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[117-338] 2.8E-10 - T[396-518] 3.9E-9
SMART
TPR_repeat (IPR019734) - T[141-174] 200.0 - T[186-219] 20.0 - T[464-497] 0.88

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value