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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S4280.g10612.01.t

Possible name(s)

Haaura.CG.MTP2014.S4280.g10612

Location

S4280 [498 / 3,630]

Sequences

Amino acid sequence

Length: 518

>Haaura.CG.MTP2014.S4280.g10612.01.p
MQNDKARKINTQLMISQCQIKIRMPHGSAIELENLITSSPVQPDDLKETANNDIKQKKYV
RAFLYYFSASKFYKEKYLGDDAAQGIKACVQAVEMFVEEMIKQDDGKKIVTDYIIPALKE
VTDDLSKIPNADPRYLIRLQAWCLQSIGLCYKHCEDFQQFADNVESAIELLKRILKEDAD
KYWVFGICLHSSGEAHEKLDQKGQAMDLYERAIEAKNDAHDWPSIQSKDDSKEMTQEKLR
ILVQFSEAKLGDARNLIKTSKFSDALDLLREIEPMLRDIEGKIKALLIKIECYMMMEKHH
KVVREMDELVRLMLSSKKSVDDVMKMAANEITAKLYISGFLLYFSACRLYKEKSAGNDAV
KGIEACVDAVQLFVEKMINQDKKMKKIVTDYIIPELEDVTDDLSEIPNSDQEVQVEQQAW
CLYRIALCFYYCQAYQRYAEFNESAIELMKKQLKEDAENYYMVGHCYNNVGHAYSCLNQK
EKSKEMYRKSLDVYNKATDWPNEERKKEDIKRTENKLR

Nucleotide sequence

Length: 1,634

>Haaura.CG.MTP2014.S4280.g10612.01.t
TTAGACAAAATATCGATTCTCATGAATGAATCCAAGTTCCANTCCAGGAAGCTCTCGAAC
TTCTTGAGGGGGGGGGGGGGATGCAAAATGATAAAGCAAGGAAGATAAACACCCAACTTA
TGATATCACAATGTCAGATAAAAATAAGAATGCCACATGGTAGCGCTATAGAGCTAGAAA
ATCTGATTACATCATCACCAGTGCAACCAGACGACTTGAAGGAAACTGCAAATAACGACA
TCAAACAAAAGAAATATGTTCGAGCATTTCTTTACTATTTCTCGGCGAGTAAATTTTACA
AAGAAAAATATCTTGGTGATGATGCAGCGCAAGGTATCAAAGCATGTGTACAAGCTGTTG
AGATGTTTGTGGAAGAAATGATCAAACAGGATGACGGGAAGAAGATTGTCACTGATTACA
TCATCCCAGCACTGAAGGAAGTCACCGATGATCTGAGCAAAATCCCAAATGCGGATCCAA
GATATCTAATCAGATTGCAAGCCTGGTGTTTACAAAGCATTGGATTGTGCTACAAACATT
GCGAAGATTTTCAACAATTTGCAGATAATGTTGAATCTGCCATCGAGCTATTGAAAAGAA
TATTAAAGGAAGATGCCGATAAATATTGGGTGTTTGGAATTTGTCTTCATAGTTCTGGTG
AAGCTCATGAGAAATTGGATCAAAAGGGGCAAGCAATGGATCTGTATGAAAGAGCTATCG
AGGCAAAGAACGATGCACATGACTGGCCGAGTATTCAGAGTAAAGATGACAGTAAGGAGA
TGACGCAGGAAAAGCTGAGGATTTTAGTGCAATTTTCAGAAGCCAAGTTAGGTGATGCAA
GGAACTTAATAAAGACATCCAAGTTTTCTGACGCTCTGGATCTTCTTCGTGAAATCGAAC
CGATGCTCAGAGATATTGAAGGGAAAATAAAAGCTCTGCTGATAAAGATAGAATGTTACA
TGATGATGGAAAAACATCATAAGGTGGTCAGAGAGATGGATGAACTTGTTCGACTGATGC
TTTCATCAAAGAAATCAGTCGATGATGTCATGAAAATGGCGGCAAATGAAATCACAGCGA
AGCTGTACATAAGTGGATTTCTCCTTTATTTCTCTGCATGCAGATTATACAAGGAGAAAT
CTGCTGGGAATGATGCAGTGAAAGGTATCGAAGCATGCGTGGATGCTGTGCAACTGTTTG
TGGAGAAAATGATCAATCAAGATAAAAAGATGAAAAAGATTGTCACTGATTACATCATCC
CAGAACTAGAGGATGTCACAGATGATCTGAGCGAAATCCCAAATTCAGATCAAGAAGTTC
AAGTTGAGCAACAGGCTTGGTGTTTGTACAGAATTGCATTGTGTTTCTACTACTGCCAGG
CTTATCAACGATATGCCGAGTTTAATGAATCTGCAATTGAACTGATGAAGAAACAATTGA
AGGAAGATGCTGAGAACTATTACATGGTTGGACATTGCTACAATAATGTTGGTCATGCTT
ACTCATGCTTAAATCAAAAAGAAAAATCGAAAGAAATGTACAGAAAATCACTGGATGTTT
ACAACAAAGCAACTGACTGGCCTAATGAGGAAAGAAAGAAGGAAGATATCAAGCGAACAG
AAAATAAGCTGAGA

InterProScan

SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[36-78] 4.17E-8 - T[128-216] 4.17E-8 - T[417-495] 5.06E-7
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[117-338] 2.8E-10 - T[396-517] 4.5E-9
SMART
TPR_repeat (IPR019734) - T[141-174] 200.0 - T[186-219] 20.0 - T[464-497] 0.88

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value