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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S81....'
  2. Transcript 'KH2012:KH.L112.2.v4....'
  3. Transcript 'Haaura.CG.MTP2014.S4...'
  4. Clone 'AHC0AAA224YH12'
  5. Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S4134.g10565.02.t

Possible name(s)

TPM2; TPM3; TPM4

Location

S4134 [607 / 3,058]

Sequences

Amino acid sequence

Length: 299

>Haaura.CG.MTP2014.S4134.g10565.02.p
ISSLLSLQRICLINQSTSKMEAIKKKMQMLKMDKENSIDRKEQAEVDRKNVEEKVGGLEE
ELHTLEKRLKGTEDELSTHQEKLGQSNDSLEAAEKKAYRISAMISLLNLFSLQAEQEVSD
LNKKISGLEDELESAQEKLAMSLTKLEDAEKAADESERGRKVIENRSLKDQEKLQLQEVH
LQEAKDIAEDADRKYEEVARKLATVEGDLERGEERSELAESKSTELEEEMKNAANNLKSL
EAAAEKYASKEAIFADEVKTLSDRLKDSEDRAESAEKLVVELEKSIDDVEGSVELYTN*

Nucleotide sequence

Length: 1,003

>Haaura.CG.MTP2014.S4134.g10565.02.t
ATATCATCTCTTCTATCTCTACAGCGCATCTGCTTAATCAACCAATCAACCTCTAAAATG
GAAGCTATCAAGAAGAAGATGCAAATGTTGAAAATGGACAAAGAAAACTCCATTGACAGA
AAAGAACAAGCTGAAGTAGACCGAAAAAACGTGGAAGAGAAAGTTGGCGGGCTCGAAGAA
GAACTTCATACCCTTGAAAAGAGACTGAAAGGAACAGAAGACGAACTCAGCACTCACCAA
GAAAAACTGGGACAATCGAACGACTCTCTCGAAGCAGCTGAAAAAAAAGCGTATAGAATC
TCTGCGATGATTTCACTTCTGAATCTCTTCTCCCTTCAGGCTGAACAAGAAGTATCTGAT
CTGAACAAGAAAATTTCGGGTCTCGAAGACGAACTCGAGAGTGCACAAGAAAAACTCGCG
ATGTCGCTCACTAAGTTGGAAGATGCTGAAAAGGCCGCTGATGAAAGCGAGCGAGGACGT
AAAGTCATTGAAAACAGATCTCTCAAAGATCAAGAGAAATTGCAACTCCAGGAAGTTCAT
CTGCAAGAGGCGAAAGACATCGCTGAAGATGCCGACAGGAAATACGAAGAAGTTGCTCGC
AAACTTGCTACGGTTGAAGGAGATTTGGAACGAGGCGAAGAGCGATCAGAACTTGCTGAG
AGTAAATCAACTGAGCTCGAGGAAGAAATGAAGAACGCTGCAAACAACTTAAAATCTCTT
GAAGCAGCTGCAGAAAAGTATGCCTCGAAAGAAGCAATTTTCGCAGACGAAGTGAAAACG
CTTTCAGACCGATTGAAAGATTCTGAAGATCGCGCTGAGTCTGCTGAGAAGCTGGTTGTG
GAATTGGAAAAAAGCATTGATGACGTAGAAGGTAGTGTTGAGCTCTATACTAATTGACGC
CTTTCATAATCAGTTAACTCTTTTAACACTGCAATTCAAAACAAAAAATTCGAATGAGAG
ATTTCAACGAAGACATCTCTGCTTACTAGAAAATCAACCAACT

InterProScan

Pfam
CLZ_dom (IPR032406) - T[33-92] 2.5E-7
Pfam
Tropomyosin (IPR000533) - T[113-296] 1.8E-62
PRINTS
Tropomyosin (IPR000533) - T[117-134] 1.4E-49 - T[153-173] 1.4E-49 - T[178-206] 1.4E-49 - T[208-231] 1.4E-49 - T[264-289] 1.4E-49

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TPM3_HUMAN 59.14 % 281 9.73E-95
TPM1_HUMAN 58.781 % 283 2.36E-95
TPM2_HUMAN 57.664 % 261 7.36E-87