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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R1.3...'
  2. Transcript 'Cisavi.CG.ENS81.R1.3...'
  3. Transcript 'Boleac.CG.SB_v3.S81....'
  4. Transcript 'KH2012:KH.L112.2.v4....'
  5. Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S4134.g10565.01.t

Possible name(s)

TPM2; TPM3; TPM4

Location

S4134 [607 / 3,044]

Sequences

Amino acid sequence

Length: 307

>Haaura.CG.MTP2014.S4134.g10565.01.p
ISSLLSLQRICLINQSTSKMEAIKKKMQMLKMDKENSIDRKEQAEVDRKNVEEKVGGLEE
ELHTLEKRLKGTEDELSTHQEKLGQSNDSLEAAEKKASDAEQEVSDLNKKISGLEDELES
AQEKLAMSLTKLEDAEKAADESERGRKVIENRSLKDQEKLQLQEVHLQEAKDIAEDADRK
YEEVARKLATVEGDLERGEERSELAESKSTELEEEMKNAANNLKSLEAAAEKYASKEAIF
ADEVKTLSDRLKDSEDRAESAEKLVVELEKSIDDVEAYLILYILSLDEVYKQKIRMRDFN
EDISAY*

Nucleotide sequence

Length: 921

>Haaura.CG.MTP2014.S4134.g10565.01.t
ATATCATCTCTTCTATCTCTACAGCGCATCTGCTTAATCAACCAATCAACCTCTAAAATG
GAAGCTATCAAGAAGAAGATGCAAATGTTGAAAATGGACAAAGAAAACTCCATTGACAGA
AAAGAACAAGCTGAAGTAGACCGAAAAAACGTGGAAGAGAAAGTTGGCGGGCTCGAAGAA
GAACTTCATACCCTTGAAAAGAGACTGAAAGGAACAGAAGACGAACTCAGCACTCACCAA
GAAAAACTGGGACAATCGAACGACTCTCTCGAAGCAGCTGAAAAAAAAGCGTCTGATGCT
GAACAAGAAGTATCTGATCTGAACAAGAAAATTTCGGGTCTCGAAGACGAACTCGAGAGT
GCACAAGAAAAACTCGCGATGTCGCTCACTAAGTTGGAAGATGCTGAAAAGGCCGCTGAT
GAAAGCGAGCGAGGACGTAAAGTCATTGAAAACAGATCTCTCAAAGATCAAGAGAAATTG
CAACTCCAGGAAGTTCATCTGCAAGAGGCGAAAGACATCGCTGAAGATGCCGACAGGAAA
TACGAAGAAGTTGCTCGCAAACTTGCTACGGTTGAAGGAGATTTGGAACGAGGCGAAGAG
CGATCAGAACTTGCTGAGAGTAAATCAACTGAGCTCGAGGAAGAAATGAAGAACGCTGCA
AACAACTTAAAATCTCTTGAAGCAGCTGCAGAAAAGTATGCCTCGAAAGAAGCAATTTTC
GCAGACGAAGTGAAAACGCTTTCAGACCGATTGAAAGATTCTGAAGATCGCGCTGAGTCT
GCTGAGAAGCTGGTTGTGGAATTGGAAAAAAGCATTGATGACGTAGAAGCTTATCTCATT
CTCTATATTCTTTCTCTAGATGAAGTTTACAAGCAAAAAATTCGAATGAGAGATTTCAAC
GAAGACATCTCTGCTTACTAG

InterProScan

Pfam
Tropomyosin (IPR000533) - T[67-282] 2.1E-68
PRINTS
Tropomyosin (IPR000533) - T[103-120] 1.6E-49 - T[139-159] 1.6E-49 - T[164-192] 1.6E-49 - T[194-217] 1.6E-49 - T[250-275] 1.6E-49

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TPM3_HUMAN 60.915 % 293 1.99E-99
TPM1_HUMAN 59.155 % 300 4.02E-102
TPM2_HUMAN 58.099 % 279 6.71E-94