- Transcript 'Boleac.CG.SB_v3.S617...' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S410.g04882.02.t
Possible name(s)
BCL2L2-PABPN1; PABPN1; PABPN1L
Gene model
Location
S410 [2,847 / 5,054]
Amino acid sequence
Length: 238
>Haaura.CG.MTP2014.S410.g04882.02.p
MSDILDQDNSLDGLNSHDGDSLGVDDSAILDNSTADISQNVDSIVEDPELEAIKARVKEM
EAEAEKLKEMQNEVEKQISLSPTQATGAVAFPSIEEKVEADARSIYVGNVDYGATAEEME
QHFHGCGSVNRITILCDKFSGHPKGFAYIEFVDKESVDTSIALDGSLFRGRQIKVNPKRT
NKPGFVFVERGGGRPRGRPRYRARGYYYPRARRAYSKSKLLFTILKKSEVSCELIYTF
Nucleotide sequence
Length: 714
>Haaura.CG.MTP2014.S410.g04882.02.t
ATGTCAGATATTCTCGATCAAGATAATAGTTTAGATGGTTTGAATTCTCACGATGGAGAT
TCCTTGGGTGTTGATGATTCCGCGATACTGGATAACTCCACAGCAGATATCTCACAAAAT
GTAGACAGCATAGTTGAAGATCCGGAGCTTGAAGCGATTAAGGCCCGAGTTAAGGAAATG
GAAGCTGAGGCCGAGAAGTTGAAAGAAATGCAAAATGAGGTTGAAAAACAAATAAGTTTG
AGTCCAACTCAAGCGACCGGAGCTGTTGCCTTTCCATCCATCGAAGAAAAAGTCGAAGCA
GATGCAAGATCAATTTATGTTGGAAATGTTGATTATGGTGCTACAGCAGAGGAAATGGAG
CAACATTTTCATGGATGTGGTTCCGTAAATCGAATTACTATATTATGTGATAAATTTTCT
GGACATCCGAAAGGGTTTGCCTACATTGAATTTGTCGATAAAGAGTCGGTTGATACTTCG
ATAGCGCTGGACGGCTCACTTTTTAGAGGAAGACAAATCAAGGTCAATCCCAAACGGACA
AACAAACCTGGATTTGTATTTGTGGAGCGTGGTGGTGGAAGGCCACGTGGGCGACCTCGG
TATCGTGCCAGAGGTTATTATTACCCGCGGGCACGCAGAGCTTACAGCAAGAGCAAATTA
TTATTCACCATACTGAAAAAATCAGAGGTGTCTTGTGAGTTGATTTATACTTTT
| PANTHER |
PABP2 (IPR034911) - T[18-213] 1.1E-91 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[95-207] 2.82E-28 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[97-185] 1.1E-24 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[103-180] 16.739 |
| SMART |
RRM_dom (IPR000504) - T[104-176] 4.5E-19 |
| Pfam |
RRM_dom (IPR000504) - T[105-174] 7.0E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PABP2_HUMAN | 72.515 % | 225 | 2.49E-73 |
| EPAB2_HUMAN | 50 % | 162 | 2.51E-49 |