- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C14.232.v1...' >
- Transcript 'Moocci.CG.ELv1_2.S45...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S410.g04882.01.t
Possible name(s)
BCL2L2-PABPN1; PABPN1; PABPN1L
Gene model
Location
S410 [2,847 / 5,016]
Amino acid sequence
Length: 228
>Haaura.CG.MTP2014.S410.g04882.01.p
MSDILDQDNSLDGLNSHDGDSLGVDDSAILDNSTADISQNVDSIVEDPELEAIKARVKEM
EAEAEKLKEMQNEVEKQISLSPTQATGAVAFPSIEEKVEADARSIYVGNVDYGATAEEME
QHFHGCGSVNRITILCDKFSGHPKGFAYIEFVDKESVDTSIALDGSLFRGRQIKVNPKRT
NKPGFVFVERGGGRPRGRPRYRARGYYYPRARRAYRGRARANYYSPY*
Nucleotide sequence
Length: 684
>Haaura.CG.MTP2014.S410.g04882.01.t
ATGTCAGATATTCTCGATCAAGATAATAGTTTAGATGGTTTGAATTCTCACGATGGAGAT
TCCTTGGGTGTTGATGATTCCGCGATACTGGATAACTCCACAGCAGATATCTCACAAAAT
GTAGACAGCATAGTTGAAGATCCGGAGCTTGAAGCGATTAAGGCCCGAGTTAAGGAAATG
GAAGCTGAGGCCGAGAAGTTGAAAGAAATGCAAAATGAGGTTGAAAAACAAATAAGTTTG
AGTCCAACTCAAGCGACCGGAGCTGTTGCCTTTCCATCCATCGAAGAAAAAGTCGAAGCA
GATGCAAGATCAATTTATGTTGGAAATGTTGATTATGGTGCTACAGCAGAGGAAATGGAG
CAACATTTTCATGGATGTGGTTCCGTAAATCGAATTACTATATTATGTGATAAATTTTCT
GGACATCCGAAAGGGTTTGCCTACATTGAATTTGTCGATAAAGAGTCGGTTGATACTTCG
ATAGCGCTGGACGGCTCACTTTTTAGAGGAAGACAAATCAAGGTCAATCCCAAACGGACA
AACAAACCTGGATTTGTATTTGTGGAGCGTGGTGGTGGAAGGCCACGTGGGCGACCTCGG
TATCGTGCCAGAGGTTATTATTACCCGCGGGCACGCAGAGCTTACAGGGGAAGAGCAAGA
GCAAATTATTATTCACCATACTGA
| PANTHER |
PABP2 (IPR034911) - T[18-227] 2.3E-94 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[95-207] 2.42E-28 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[97-185] 9.6E-25 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[103-180] 16.739 |
| SMART |
RRM_dom (IPR000504) - T[104-176] 4.5E-19 |
| Pfam |
RRM_dom (IPR000504) - T[105-174] 6.4E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PABP2_HUMAN | 68.687 % | 237 | 1.96E-78 |
| EPAB2_HUMAN | 49.754 % | 165 | 2.29E-50 |