- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S3.g00131.02.t
Possible name(s)
BTRC; FBXW11; TRAF7
Gene model
Location
S3 [239,490 / 244,415]
Amino acid sequence
Length: 841
>Haaura.CG.MTP2014.S3.g00131.02.p
MKQHSFLASNGGGNKASIGSSHQHGVSRGSSRANSVISNKSVSSKSVNSPEHIISSPKMA
SNRPRVPSMPYTDQRYRPGAMTPQNPHPTDMLTDRRLLRSSPSVVRRHSKSSITRVDGGF
ILGSGRPPINAGKIPDQIKPKIETTFGPAYSAVTTITTDEGDKVQYHHDRTPSVSSYRSQ
NDNDDVQSGSKHGSLSRSHHNELFSRSSRTGSALSSSSTLSRTSYRSPVSDEEIPLMFAE
PPPIQLMCKICNRVYKDPTIMSCGHSYCKACSMSLELCPVDGKSMTAMIENIVVREQVGS
LFVHCRLGVRLSDLSGEYEIDPNGCPFTIKLAERRKHESECEYAPVTCPNNPACPPMLKR
HLQEHLETCKHMKCPNHKFGCLFIGDQDSCTDHVKTCKFEMAKDFLQLTQDRINELTLDM
RQRDEENSFLRSMLSKTADRLDEMEKAYEIKIEVLTLNQNKLTDELLQMRQDTAIISNEL
QDLNTKLNMGAIGMYDPQQIFKCKGTFVGHSGPVWCLYVHGDLLFSGSSDKNIKVWDTAT
NYKCQKTLESHGGIVLALTTKGSYLYSGSADCSIKVWDISKLEEVNSVVAHENAVCTLVC
SYNMLFSGSLKNIKVWTIEDSKLILRQELKGLNHWVRALVASQNYIYSGCYQTIQIWDVR
TLECVRVLETSGGSVYSIAVTNHHVLCGTYENVIHVWDVGNYDQVATLTGHVGTIYSLSV
LSTPDQTKVFSASYDRSLRVWSMDNMICTQTLIRHQGSVTSLAVSRGRVFSGAVDSTVKV
WQYPDFCSAWCSTHRGSNEHCLSAKSQTKSGQGTFLLFPECENLAQKVIKCSHGSIFFTQ
*
Nucleotide sequence
Length: 2,612
>Haaura.CG.MTP2014.S3.g00131.02.t
ATGAAGCAGCACAGTTTTTTAGCAAGCAATGGTGGTGGAAATAAAGCTTCTATTGGATCA
TCACATCAACACGGCGTGTCTCGAGGTAGTTCCAGAGCGAATTCTGTGATCTCAAACAAA
TCTGTTTCGTCTAAATCCGTCAACTCTCCAGAACATATCATATCCTCGCCCAAAATGGCA
TCAAACCGACCCCGCGTACCGTCGATGCCGTACACGGACCAGAGATACCGTCCTGGGGCG
ATGACTCCGCAGAACCCTCATCCTACAGATATGTTGACAGACAGACGACTGCTAAGATCA
AGTCCGTCTGTTGTCCGGCGTCATTCTAAATCTTCCATCACAAGAGTCGATGGAGGATTC
ATATTGGGGTCAGGAAGACCTCCAATAAATGCTGGAAAAATTCCAGATCAAATCAAGCCC
AAGATTGAAACTACCTTTGGTCCAGCCTACTCTGCGGTCACCACTATTACAACAGATGAA
GGAGATAAAGTTCAGTATCATCATGACAGGACGCCTTCGGTTTCAAGTTACAGATCTCAG
AATGACAATGACGATGTTCAAAGTGGCAGCAAACATGGCAGTTTGTCTCGCAGTCACCAT
AACGAGTTGTTTTCACGATCGTCCCGGACCGGCTCTGCATTATCCTCGTCATCCACACTC
TCCCGAACTTCTTATAGATCGCCCGTTTCCGATGAAGAGATCCCACTCATGTTTGCCGAG
CCCCCTCCGATTCAACTGATGTGCAAGATATGTAACAGAGTTTACAAAGATCCAACAATT
ATGTCATGTGGTCACTCATATTGCAAAGCATGCAGTATGTCTTTGGAATTGTGTCCCGTT
GATGGGAAAAGTATGACAGCCATGATCGAAAACATTGTGGTCAGAGAGCAAGTTGGGTCT
TTATTCGTTCACTGCAGGCTCGGTGTAAGATTGTCTGATTTATCGGGAGAATATGAGATC
GATCCGAATGGTTGTCCTTTCACTATCAAGCTGGCAGAGAGAAGAAAGCATGAATCGGAA
TGCGAGTACGCCCCAGTTACGTGCCCCAACAACCCAGCTTGCCCACCTATGTTGAAAAGA
CACTTGCAAGAACATTTAGAAACCTGCAAGCACATGAAATGTCCCAATCATAAATTCGGA
TGCCTTTTCATTGGCGACCAAGACAGTTGTACCGATCATGTTAAAACTTGCAAGTTTGAG
ATGGCAAAGGACTTTCTTCAGCTGACCCAGGATAGAATCAATGAATTAACTTTAGATATG
AGACAAAGAGATGAAGAAAATAGTTTCCTCAGATCTATGTTGTCAAAAACTGCAGACAGA
TTGGATGAAATGGAAAAAGCATATGAAATAAAAATAGAGGTTTTGACACTAAACCAGAAC
AAACTCACGGACGAGCTACTGCAAATGAGACAAGACACTGCCATTATATCAAATGAATTA
CAGGATCTCAATACAAAATTGAATATGGGTGCAATAGGAATGTACGATCCGCAACAAATT
TTCAAATGCAAAGGAACTTTTGTCGGACACAGTGGTCCGGTCTGGTGTCTATACGTGCAT
GGAGATCTCCTGTTTAGTGGTTCTTCGGATAAAAATATTAAAGTTTGGGACACCGCAACA
AATTACAAATGTCAAAAAACACTGGAAAGTCACGGCGGAATCGTTCTAGCATTGACTACG
AAAGGAAGCTATTTGTACAGTGGTTCTGCTGATTGTTCAATAAAGGTATGGGACATCAGT
AAATTAGAGGAAGTCAATTCCGTAGTGGCTCATGAAAATGCAGTGTGCACTTTAGTTTGC
TCTTACAACATGCTATTCAGTGGATCTTTGAAAAACATCAAGGTGTGGACTATCGAAGAT
TCCAAATTAATTCTCAGACAAGAATTGAAAGGTTTGAACCACTGGGTTCGAGCTCTGGTA
GCTTCACAAAATTACATTTACAGTGGCTGCTATCAGACAATACAGATATGGGATGTACGT
ACACTAGAATGTGTCAGAGTTCTGGAGACATCAGGAGGAAGTGTGTACTCGATTGCTGTA
ACTAACCATCATGTCTTGTGTGGTACATATGAGAATGTTATACACGTTTGGGATGTTGGA
AATTATGACCAAGTTGCTACCTTGACCGGACATGTCGGCACAATCTACTCTCTTTCTGTA
TTGAGCACGCCTGACCAAACCAAGGTGTTCAGTGCTTCGTACGATCGCTCTTTGAGGGTT
TGGAGCATGGACAATATGATTTGTACACAAACACTAATCAGACATCAGGGTAGTGTTACT
TCACTTGCCGTCTCCAGGGGCAGAGTATTTTCAGGCGCTGTTGATTCCACTGTTAAAGTG
TGGCAATATCCGGATTTTTGCTCAGCTTGGTGTTCTACCCACAGAGGGTCAAACGAACAC
TGTTTGAGTGCAAAATCACAAACGAAGTCGGGTCAAGGGACCTTTTTACTCTTTCCTGAA
TGTGAAAACCTTGCCCAAAAAGTTATTAAATGTTCACATGGGTCTATCTTCTTTACACAA
TGACCTTTTTTTTCATTCGTCTTCTTCATTATAACAATTCTTTAGCGAATATAAATTTCT
TGATAGCCTCTAAATTATCAGTTATATATTGA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[244-292] 2.6E-8 - T[319-366] 2.8E-6 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[248-272] 5.0E-6 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[248-281] 10.748 |
| SMART |
Znf_RING (IPR001841) - T[248-281] 7.8E-5 |
| SUPERFAMILY |
TRAF-like (IPR008974) - T[300-370] 1.31E-9 |
| ProSiteProfiles |
Znf_TRAF (IPR001293) - T[337-407] 9.602 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[467-701] 2.1E-45 - T[702-817] 1.0E-16 |
| SMART |
WD40_repeat (IPR001680) - T[500-537] 2.5E-8 - T[541-578] 4.3E-5 - T[581-617] 2.1 - T[622-658] 7.1 - T[661-698] 0.069 - T[701-742] 2.6E-4 - T[745-782] 1.9E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[502-537] 3.6E-6 - T[543-578] 1.3E-4 - T[704-742] 3.1E-4 - T[748-781] 0.016 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[502-796] 2.47E-65 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[507-782] 42.0 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[507-546] 11.611 - T[548-587] 11.043 - T[708-751] 10.308 - T[752-782] 9.706 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[524-538] . - T[565-579] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[524-538] 1.7E-6 - T[565-579] 1.7E-6 - T[769-783] 1.7E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBW1A_HUMAN | 26.708 % | 119 | 5.25E-28 |
| FBW1B_HUMAN | 27.215 % | 124 | 1.65E-29 |
| TRAF7_HUMAN | 59.443 % | 818 | 0 |