Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S38.g00994.01.t

Possible name(s)

CWF19L1; CWF19L2; DBR1

Gene model

Haaura.CG.MTP2014.S38.g00994

Location

S38 [33,156 / 37,135]

Sequences

Amino acid sequence

Length: 517

>Haaura.CG.MTP2014.S38.g00994.01.p
ACCLLLETIEDIMESLKIMICGDVCGNIELVYNRIKKLKKKGSNFDMLLCIGDFFGDDIT
ANWLSYRNGTKKPPITTYILGPNNSQHLSHYEGGDEDGFELGNKGIFTATGGLKIVYLSG
IESPSGSSPAPKYCFSHSDVKSLVMSVTKSGSKDFVGVDLLLTSQWPKSIAAYGNSPSEE
RCLKCGSVLVSQLASAIRPRYHFAGLEKVHYERLPYRNHVVLSESVRHTTRFIALSSVGN
AEKQKYLYAFTISPMCNMDQSELVKQPQDATECPYYRKGKQDSNAEGKSIAQLSIESLMQ
DNEASGQYRWNVQQNQNQGRKRKSEDHKAFKQRKTERPQDWSCWFCLGGEKVEKHLVASV
GNLTYLAMAKGGIIDDHILILPIAHHASSLDLPDDTAMECLVYKQAVIKAMKSIGKQCIF
FERNYRTDHMQIQVLPANSPFFHVELPDGSRLLHRIRHFFPLQFGREAVCSPSVLNMKNR
VNWRDCVLAKEKEMKFTQKFRDFFKPHDFTLEGGSDE

Nucleotide sequence

Length: 1,551

>Haaura.CG.MTP2014.S38.g00994.01.t
GCTTGCTGCTTGCTTTTAGAAACTATCGAGGACATCATGGAATCGTTAAAAATAATGATT
TGTGGTGATGTGTGTGGAAACATCGAACTTGTTTACAACAGGATAAAGAAACTTAAAAAG
AAAGGATCGAATTTTGATATGCTCTTATGCATTGGAGATTTTTTTGGCGATGATATTACA
GCTAATTGGTTGTCATATCGCAACGGGACAAAGAAGCCTCCCATCACGACTTATATTCTA
GGTCCAAACAATTCTCAGCATTTATCACATTATGAAGGAGGTGATGAAGATGGGTTTGAA
CTTGGTAATAAAGGAATCTTCACAGCAACCGGCGGATTGAAAATTGTTTATCTCAGTGGG
ATAGAATCCCCATCTGGTAGTTCCCCAGCACCCAAGTATTGCTTCTCACACAGCGACGTC
AAGTCTCTAGTCATGTCTGTCACTAAATCTGGTTCTAAAGATTTTGTGGGAGTTGATTTG
CTGCTGACCTCTCAGTGGCCTAAGTCCATAGCAGCATATGGTAATTCTCCGAGTGAAGAG
AGATGCCTCAAATGTGGATCGGTTCTTGTTTCTCAGCTAGCAAGTGCGATACGACCACGT
TATCATTTTGCTGGACTAGAAAAAGTTCATTATGAGCGTCTTCCCTACAGAAATCATGTT
GTATTGTCCGAGTCTGTGAGACATACAACCCGTTTTATCGCTTTATCTTCTGTCGGCAAT
GCGGAGAAACAGAAGTACTTGTATGCCTTCACGATTAGTCCTATGTGTAATATGGATCAG
TCAGAGCTTGTAAAGCAACCACAAGATGCCACTGAGTGTCCATATTACAGAAAAGGAAAA
CAGGACAGCAATGCCGAAGGAAAAAGTATAGCACAGTTGTCTATAGAATCACTCATGCAA
GATAATGAGGCTTCCGGACAGTATCGCTGGAATGTCCAACAGAATCAAAACCAGGGTAGA
AAGAGAAAATCAGAGGACCATAAAGCGTTTAAACAAAGAAAAACAGAAAGACCCCAAGAC
TGGTCATGCTGGTTTTGTCTTGGGGGCGAGAAAGTTGAGAAACATCTGGTCGCAAGTGTG
GGTAATTTGACATATCTTGCAATGGCAAAAGGTGGCATTATCGATGATCACATACTTATT
CTCCCAATAGCCCATCATGCTTCCTCATTAGATCTTCCTGACGACACAGCTATGGAGTGT
TTAGTCTACAAGCAGGCTGTGATAAAAGCTATGAAATCAATCGGGAAGCAGTGTATTTTC
TTTGAGCGCAATTATCGCACTGATCATATGCAAATTCAGGTGTTGCCTGCCAATTCTCCC
TTTTTCCATGTTGAACTACCAGATGGCAGTAGGCTCTTGCACAGGATTCGTCACTTCTTC
CCTTTACAATTTGGAAGGGAAGCTGTGTGCAGTCCTTCAGTCTTGAACATGAAGAACAGA
GTGAACTGGAGAGACTGTGTACTTGCCAAAGAAAAGGAGATGAAGTTCACGCAAAAGTTC
CGTGATTTCTTCAAGCCTCACGATTTTACTTTGGAAGGAGGCTCCGACGAA

InterProScan

Gene3D	HIT-like_sf (IPR036265) - T[302-448] 7.8E-6
Pfam	Cwf19-like_C_dom-1 (IPR006768) - T[335-438] 4.1E-27
SUPERFAMILY	HIT-like_sf (IPR036265) - T[338-416] 6.43E-6
Pfam	Cwf19-like_C_dom-2 (IPR006767) - T[433-510] 3.7E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
C19L1_HUMAN	44.444 %	461	1.62E-158