- Transcript 'Cisavi.CG.ENS81.R12....' >
- Clone 'cicl093h16' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S384.g04709.01.t
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
S384 [21,509 / 25,630]
Amino acid sequence
Length: 573
>Haaura.CG.MTP2014.S384.g04709.01.p
MKRKLDSRTDACKLQSPEKKACKTSLSLLPSPNASLPTFGELREAVTRGIGIQNFSSDNK
LPFEREDYESGGEILSVTTVRPKAPIKVEGLTQWLQKFKNWNSTERIAALDELIDSCEPR
QVRYMLEVIEPQFQRDFISLLPKELALYVLSFLEPKALLTAAQTCRYWHILTEDNLLWRE
KCDEEGINEPYYPKVCKNSWKCRKPNATNVQPSAWKAAFLRQHRIEMNWRRGEHKSTKLL
KGHDDHVITCLQFNGTRIVSGSDDNTLKVWSAVSGKCLRTLTGHTGGVWASQMRKNMIIS
GSTDRTLKIWNVDSGQCIHTLHGHTSTVRCMALHDNIVVSGSRDATLRAWDVDTGECLHV
LTGHMAAVRCVCYDGKLVVSGAYDYMVKVWDPVKEECLHTLQGHTNRVYSLQFDGVHVVS
GSLDTSIRVWSVETGLCLHTLVGHQSLTSGMELKNNILVSGNADSTVKMWDIITGDCLKT
LEGPNKHQSAVTCLQFYGKFVVTSSDDGTVKLWDVKSGKAIRDLVSLDSRGSGGVVWRIR
ASQTKLVCAVGSRNGTEETKLLVLDFDPDSKQ*
Nucleotide sequence
Length: 1,797
>Haaura.CG.MTP2014.S384.g04709.01.t
ATGATTAACATTTTTGCTTGGTATGAATCATGGTCGGTTTTCATTATGGTTAAGAGCTGT
TTCGCTTTAGCTTTTTAGATGAAAAGAAAATTGGACAGCAGGACAGATGCCTGCAAGCTG
CAGTCGCCTGAAAAGAAAGCGTGCAAGACGTCGTTAAGTCTACTACCGAGCCCCAACGCC
TCATTGCCCACGTTCGGGGAGCTTCGGGAAGCAGTCACCAGGGGCATTGGAATTCAAAAC
TTTTCTTCAGACAATAAACTTCCATTTGAAAGAGAAGACTATGAATCCGGTGGGGAAATC
CTATCTGTCACAACTGTCAGGCCAAAAGCACCGATAAAAGTTGAAGGTCTTACCCAATGG
CTTCAAAAATTCAAAAACTGGAATTCAACCGAGAGGATCGCGGCCCTGGACGAATTGATC
GACTCTTGCGAGCCACGGCAGGTCCGGTACATGCTCGAAGTAATCGAACCACAATTTCAG
CGGGATTTTATTTCTCTTTTGCCCAAAGAGCTTGCCCTTTACGTCCTGTCATTCCTGGAA
CCAAAAGCCCTACTTACCGCCGCCCAAACTTGCCGATACTGGCACATCTTGACGGAAGAC
AATCTCTTGTGGAGAGAAAAATGTGACGAAGAAGGAATAAACGAACCTTATTATCCAAAA
GTTTGTAAGAATTCATGGAAGTGTCGAAAACCGAATGCTACCAACGTGCAACCAAGTGCC
TGGAAAGCAGCATTCTTGCGACAGCATCGTATTGAAATGAACTGGAGGAGAGGTGAACAT
AAATCAACCAAGTTACTCAAGGGCCATGACGATCATGTGATAACGTGCTTGCAGTTTAAC
GGCACTAGAATAGTGAGTGGCTCAGATGACAACACATTGAAGGTTTGGTCTGCAGTATCA
GGCAAGTGTTTGAGAACGTTAACCGGCCATACGGGAGGTGTCTGGGCTTCGCAGATGCGC
AAGAACATGATCATTAGCGGTTCAACTGACAGAACTTTGAAGATATGGAATGTCGATTCA
GGTCAGTGCATTCATACACTTCATGGGCATACATCGACCGTTCGTTGCATGGCTCTGCAC
GATAATATTGTTGTAAGCGGTTCCAGAGATGCCACGTTGCGTGCCTGGGACGTTGATACC
GGTGAATGCCTCCACGTTCTGACTGGGCACATGGCAGCGGTGAGGTGCGTGTGCTATGAC
GGAAAACTGGTTGTGTCTGGAGCTTACGATTACATGGTCAAGGTTTGGGATCCTGTAAAA
GAGGAATGTCTGCATACGCTTCAAGGCCATACTAATAGAGTGTATTCTTTACAATTTGAT
GGAGTACATGTTGTCAGCGGTAGTCTGGATACTTCGATTCGTGTGTGGTCGGTGGAAACT
GGTCTGTGTCTTCACACCTTGGTCGGGCATCAATCTCTGACTTCGGGGATGGAGCTCAAA
AATAATATCTTGGTGTCAGGGAATGCGGATTCAACAGTCAAAATGTGGGATATAATCACA
GGGGATTGTTTGAAGACTCTTGAAGGTCCCAACAAGCATCAGAGTGCCGTAACTTGTCTT
CAGTTTTATGGGAAATTTGTTGTCACTAGCTCAGATGATGGAACAGTTAAACTTTGGGAT
GTGAAATCCGGGAAGGCGATACGCGATCTTGTCTCCCTCGATTCGCGAGGATCCGGCGGA
GTTGTGTGGAGAATCCGCGCTTCTCAAACAAAGCTCGTCTGCGCAGTGGGCAGCAGAAAT
GGTACCGAAGAGACGAAGCTGCTTGTTCTCGATTTTGATCCGGATTCTAAGCAGTGA
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[122-227] 1.44E-21 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[135-181] 11.697 |
| Pfam |
F-box_dom (IPR001810) - T[139-182] 6.5E-11 |
| SMART |
F-box_dom (IPR001810) - T[141-181] 3.6E-5 |
| SMART |
WD40_repeat (IPR001680) - T[233-271] 1.6E-5 - T[274-311] 3.3E-7 - T[314-351] 8.2E-9 - T[354-391] 5.8E-7 - T[394-431] 1.1E-7 - T[434-471] 0.016 - T[474-514] 5.1E-7 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[233-571] 2.5E-122 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[234-556] 7.32E-94 |
| Pfam |
WD40_repeat (IPR001680) - T[238-271] 4.0E-6 - T[275-311] 1.6E-5 - T[315-351] 5.7E-5 - T[355-391] 2.4E-7 - T[396-431] 1.2E-6 - T[437-471] 0.0091 - T[475-514] 2.1E-7 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[240-523] 64.541 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[254-280] 10.375 - T[281-320] 13.048 - T[321-360] 14.285 - T[361-400] 11.177 - T[401-440] 13.249 - T[441-480] 11.879 - T[484-523] 13.583 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[298-312] . - T[338-352] . - T[458-472] . - T[501-515] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[298-312] 4.8E-9 - T[458-472] 4.8E-9 - T[501-515] 4.8E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 70.087 % | 796 | 0 |
| FBW1A_HUMAN | 31.788 % | 240 | 1.81E-71 |
| FBW1B_HUMAN | 30.562 % | 235 | 2.36E-70 |