- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S37.g00972.01.t
Possible name(s)
PARN; PNLDC1
Gene model
Location
S37 [33,046 / 36,203]
Amino acid sequence
Length: 709
>Haaura.CG.MTP2014.S37.g00972.01.p
MEVTRNNFRETMPKIEKAIAKANFIAIDGEFSGVTNGNYILTNYDSPEERYHKIRQNMSE
FLLMQYGIVFFHWDAPKEQYIAEAFNFYIFPVCSSGSGMKDRIFSCQSSSIDFLTAQGFD
FNKVFHSGIPYLRPGEEATVRTTLTEKHLQRVQNFKSPRKSLETNNGSAEPCSPAGSPTL
ITDPKTQAFVDGVKKKVEEFLKSSQEKDSLKLEPCNSYLRKILYETLPTMFNEPLTLEAE
INDRTKQRYIVVTRAGNEKTIQDRKEQARAKDDSFLQDAIGFSKIIQMLSQSQKMIVGHN
IFLDLMFTLQQFVCEPLQTLEEFKSVLRCWFPKLLDTKLMGSMLPFRDLVTSTALGEMHS
RLSNLPFTLPKIVPPEKYRPSESNLDMDINLHEAAYDAYITGVSFLSMLNFLSSFRKQGN
NHTMANPSSEIISPYLNKIFLMKSPDIPYLNLTGSDLTPSRSHVFHVQFPPTWKTSDIRM
VFGSFGNAINISWINDTQCFVGLYNKSQAKLVKKSLLNAGSNESDEYTIRSYEEYQRDVA
GEIYTVPLYRPRPPPVYSKNKVWRPNHNNSNATTSTETSSKLLTPSSSTSFTACLAATKI
LSSTGQTEMLKAGQKRSGDESCNSSQPELGESKAADEPETKRQKSQDAIETDPGVEKSQG
NTDIPTLLVDHADEKDVPMQDAMEGSSGSNHSDTNHSTSAFEVPTNWD*
Nucleotide sequence
Length: 2,127
>Haaura.CG.MTP2014.S37.g00972.01.t
ATGGAAGTGACTCGCAATAACTTCCGGGAGACAATGCCCAAGATTGAGAAGGCGATTGCG
AAAGCTAATTTCATTGCTATCGATGGAGAATTCAGCGGAGTCACGAATGGAAATTACATT
TTGACAAACTACGACTCTCCAGAAGAACGATATCATAAAATACGTCAGAACATGTCTGAA
TTTCTGCTCATGCAATATGGTATAGTGTTTTTTCATTGGGATGCACCAAAGGAGCAGTAT
ATTGCTGAAGCCTTCAATTTCTACATATTTCCAGTTTGCTCTTCTGGTTCTGGGATGAAA
GATCGAATATTTTCTTGCCAAAGTTCCAGCATCGATTTTCTTACTGCTCAGGGCTTCGAT
TTCAACAAAGTTTTTCACAGTGGCATTCCTTACCTCAGACCAGGTGAAGAGGCTACTGTG
AGAACAACACTCACTGAAAAACATTTGCAGCGAGTACAAAATTTTAAATCACCAAGAAAA
AGTCTCGAAACAAACAACGGCTCTGCAGAGCCTTGCAGTCCGGCTGGAAGCCCGACGCTT
ATAACAGATCCAAAAACCCAAGCGTTTGTTGACGGAGTTAAGAAGAAAGTGGAAGAGTTT
TTAAAATCTTCCCAAGAGAAAGATAGTTTGAAGCTAGAACCTTGTAACAGCTATTTGAGG
AAGATATTGTATGAAACTTTGCCAACAATGTTCAATGAACCTCTCACTCTGGAAGCTGAA
ATAAATGATCGTACAAAGCAAAGATATATCGTAGTAACTCGAGCCGGGAATGAAAAAACA
ATTCAGGATAGGAAGGAACAAGCGAGAGCAAAAGACGATTCCTTTCTACAAGATGCAATT
GGATTTTCAAAAATTATCCAGATGCTAAGTCAGAGTCAAAAGATGATTGTTGGTCACAAT
ATCTTCCTTGATCTGATGTTCACATTGCAGCAGTTTGTTTGTGAGCCTCTTCAAACCCTT
GAAGAATTTAAATCTGTACTTAGATGCTGGTTTCCCAAGCTTCTTGACACCAAGTTGATG
GGTAGTATGCTACCTTTCAGGGATCTCGTCACTTCTACTGCATTGGGAGAAATGCATTCG
AGGTTATCCAACCTACCTTTTACTTTGCCAAAAATAGTTCCGCCTGAAAAATACCGCCCA
TCCGAATCAAACCTGGACATGGATATTAATTTGCATGAAGCAGCATATGACGCATACATC
ACAGGTGTTTCTTTCCTATCGATGTTAAACTTCTTATCATCCTTTCGGAAGCAAGGAAAC
AATCATACAATGGCCAATCCGAGTTCAGAAATCATTTCTCCCTATCTCAATAAAATCTTT
TTGATGAAAAGTCCGGATATACCATACCTGAATCTGACAGGCAGTGACTTGACTCCCTCC
CGAAGCCATGTTTTCCATGTTCAATTTCCCCCTACTTGGAAGACTTCTGATATAAGAATG
GTATTCGGTTCATTCGGGAATGCGATAAACATATCATGGATTAATGATACTCAGTGCTTC
GTGGGACTTTATAATAAATCTCAGGCAAAGTTGGTCAAAAAATCACTCTTGAATGCTGGG
AGCAATGAATCGGATGAATATACTATCAGATCTTACGAGGAATACCAAAGAGACGTAGCG
GGTGAAATATATACAGTTCCACTATATCGACCACGCCCCCCTCCAGTTTACTCAAAAAAC
AAGGTTTGGAGGCCCAACCACAATAACAGTAATGCCACAACATCCACTGAAACATCTTCA
AAGCTTTTGACCCCATCAAGTTCTACTTCTTTCACTGCATGCTTGGCAGCTACTAAGATC
TTGTCCTCGACTGGACAAACAGAAATGTTGAAAGCCGGACAGAAGCGAAGTGGTGACGAA
TCTTGCAATTCTTCTCAACCGGAGCTTGGCGAAAGTAAAGCGGCCGATGAACCAGAAACA
AAACGTCAAAAATCCCAGGATGCCATCGAAACTGACCCCGGGGTAGAAAAGTCGCAAGGC
AACACAGATATCCCAACTCTCTTAGTTGATCATGCTGATGAGAAGGACGTGCCCATGCAG
GATGCCATGGAAGGCAGTTCTGGAAGCAACCATTCTGACACCAATCATTCCACCAGTGCA
TTTGAGGTGCCAACTAATTGGGACTGA
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[1-133] 1.69E-56 - T[279-414] 1.69E-56 |
| Gene3D |
RNaseH_sf (IPR036397) - T[2-144] 1.3E-109 - T[257-410] 1.3E-109 |
| Pfam |
RNase_CAF1 (IPR006941) - T[3-405] 4.6E-79 |
| Gene3D |
R3H_dom_sf (IPR036867) - T[168-256] 1.3E-109 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[182-260] 1.57E-14 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[187-256] 11.398 |
| Pfam |
R3H_dom (IPR001374) - T[189-254] 6.6E-6 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[448-516] 8.01E-10 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[449-542] 5.5E-26 |
| Pfam |
PolyA-riboNase_RNA_binding (IPR014789) - T[454-537] 1.8E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PARN_HUMAN | 43.043 % | 433 | 1.9E-143 |
