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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S378.g04675.01.t

Possible name(s)

DLX3; MSX1; MSX2

Location

S378 [58,249 / 60,545]

Sequences

Amino acid sequence

Length: 386

>Haaura.CG.MTP2014.S378.g04675.01.p
MLSENSEIEQTILNQEVEVSDDSNSEKNLSGITEEKTKVMDEPEKSDKEDLAKSEEENPK
KRKFSFSIEYLIGNSEPKKKHIENSNFHQYVLPYVGTYYPDYGTKAENDSEAVCMKNYHC
LSNYGKTDEYAPVRTDSVSPNEGFFHEETSKYSPGSNSRLSLTELSPPLRQFSPQSQPLH
STPSKKSENSGTAFCNLRKHKPNRKPRTPFTTHQLISLEKKFMAKQYLSIAERAEFSASL
QLSETQVKIWFQNRRAKSKRLQEAKLEQSNFVAAACRALRSEQGNLSSSHLYSGYPPAAG
LFPHIHSPNIRLGGAAKYPEIQSPKVPENSFVTSIDFRATALQQMHIPTNVVEQGFSSPF
SSFYPGKIADHRRSISSSLPLPILQ*

Nucleotide sequence

Length: 1,308

>Haaura.CG.MTP2014.S378.g04675.01.t
ATGGATTTACCGGAACGAGTCAGGACCGTAGACGTTCTGTCTCGCCCAAGACATTAAAGA
CGTCCGCCAGAATTGAACGAGCGTGATAATGGGAGGTTGGAGTGGAAATGGGGGAAGCCC
AAGAGATTTTTGAAACGCATAACTAGCAAAATGTTGAGTGAAAATTCTGAAATAGAACAG
ACAATTTTAAACCAGGAAGTTGAAGTATCCGATGATTCGAATTCGGAAAAAAATCTCTCC
GGAATCACGGAGGAAAAAACAAAAGTTATGGACGAGCCGGAGAAATCGGACAAGGAGGAC
CTAGCAAAGTCTGAAGAGGAAAATCCAAAGAAACGTAAATTTTCCTTCAGCATAGAATAT
CTAATTGGTAACTCCGAGCCTAAGAAAAAGCATATCGAGAACAGCAATTTCCATCAATAC
GTTTTACCTTACGTGGGAACGTATTACCCCGATTACGGTACGAAAGCAGAAAATGACTCT
GAGGCAGTGTGCATGAAAAATTATCACTGCCTCTCAAATTACGGTAAAACGGATGAATAC
GCGCCTGTTAGGACCGACTCGGTATCGCCGAATGAAGGATTTTTTCACGAAGAAACATCG
AAATACTCACCTGGAAGTAATTCTAGACTCAGCTTAACAGAATTGTCACCTCCTTTGAGA
CAGTTTTCTCCACAATCTCAACCGCTTCATTCAACACCCTCAAAAAAATCAGAAAATTCA
GGCACAGCGTTTTGTAATCTACGGAAGCACAAGCCAAACAGAAAACCGAGGACCCCGTTT
ACAACACATCAATTGATATCTTTGGAAAAGAAGTTTATGGCCAAACAGTATCTGTCCATA
GCGGAGCGGGCAGAATTTTCAGCTTCTCTACAGCTTTCAGAAACGCAGGTTAAAATTTGG
TTCCAAAACAGAAGAGCAAAGTCCAAACGATTGCAGGAAGCCAAACTTGAGCAGAGCAAC
TTCGTTGCAGCGGCTTGCCGCGCATTGAGATCGGAGCAGGGAAATTTATCTTCTTCGCAT
CTTTATTCGGGCTATCCACCAGCAGCAGGACTCTTCCCTCACATTCATTCGCCGAATATA
CGTCTCGGTGGAGCTGCTAAGTATCCCGAAATTCAGTCGCCTAAAGTTCCAGAAAATTCA
TTTGTAACAAGCATCGATTTCAGAGCTACAGCACTACAGCAGATGCACATACCGACGAAT
GTTGTAGAGCAGGGTTTTTCCTCTCCGTTTTCTTCGTTTTATCCCGGGAAGATCGCAGAT
CATCGTCGTTCAATATCGTCTTCTCTTCCGTTACCTATTCTTCAATAA

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[189-262] 7.27E-23
ProSiteProfiles
Homeobox_dom (IPR001356) - T[201-261] 19.953
SMART
Homeobox_dom (IPR001356) - T[203-265] 4.8E-24
Pfam
Homeobox_dom (IPR001356) - T[204-260] 4.6E-21
CDD
Homeobox_dom (IPR001356) - T[204-262] 8.05059E-21
PRINTS
Homeobox_metazoa (IPR020479) - T[225-236] 7.7E-6 - T[240-250] 7.7E-6 - T[250-259] 7.7E-6
ProSitePatterns
Homeobox_CS (IPR017970) - T[236-259] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DLX3_HUMAN 47.423 % 81.3 2.36E-17
MSX1_HUMAN 77.215 % 130 3.4E-35
MSX2_HUMAN 77.215 % 130 3.14E-35