Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,017

>Haaura.CG.MTP2014.S376.g04664.01.p
NLQDGGDGHVGTVVEVGTSGSRMSPDKTVIVQWDNGRRTNYRVGHQGAYDLLVFDAAPAG
IKHPNKRCDGCGRRGIKGVRWHCTQCEDYDLCTNCYMANAHNIQHKFKRFLTNKSTGVLI
PKRAKCTRSQAKGIFPGAKVIRGYDWVWRDQDGGNGNIGTVTDILGWNNDTDASVASVTW
PGRSTKNVYRMGYRGKVDLKYVVPEKSPTYHYKEHLPVLGKDELDPSLVPPPKPCPFTVG
DRVRVTLPLEILKPMQKGHGGWNPKMAELIGTVGTVHRITQTGDIRVQYPLESPAAATTS
SATPTSSSDTNRWTFNPAALSRVASDSSKQEQHFLVKDHVRVIDDSEKVKSLQSADHGNW
NEKMNEIIGQKGIIIEVYPDGDVRVEFSPQRQWTFNPACLLHDPPKQRSPILNENYNGAT
CSTPAMGLGQSKKGSPAEIINKASRGDLIGLKQLINSYPSMVDVETPKGNTALQIAAVKG
HIDVVRFLLKKRASISKTDAAGDNALHFAMIGKNEECVQTILEALPLMQINSVNKKKESP
LHIAVIRENIQWAKRILEMGCDVNLQDKDGDTACHICITNSDNPDMMRVIMSQHNFNPEL
TNALGFNIFHQAALKGRLESAKAILERYPNIVRVAKKDGYTALHLSAINGREEFTQMLID
KCLFLLDMTDAKKQTALHLAALENHVSIVNGLVRAGGSVSIMTSDGKTCLHCAIMNKTDQ
CEEESNDFSTISTESAMSSEFPLDNILPRSPEWEQVKNILIRNHLKSNPNLLELAIACFL
VCSGADPTVTDRELHRNAYELVDSNNARAALKECFEIANQEILASEFSNFASMKENPSKE
FSTSPSLAHGHSSKSKNLFRKTLSESLCNSHSSSDECRHRTSSFPQECMSCADELASVVF
KPCGHKVVCLECCVRMKKCIKCHGMITSKVDSEGNEIPIPLPSGGFKSIASMEHETVVQL
EQKVRELQESNLCNICMERSIDAALRCGHRFCQKCASSFRRCPICRKNITGIIRLY*

Nucleotide sequence

Length: 3,051

>Haaura.CG.MTP2014.S376.g04664.01.t
AATTTGCAGGATGGCGGTGATGGTCACGTTGGAACCGTGGTAGAAGTCGGCACCAGTGGA
AGCAGGATGTCTCCAGATAAGACAGTCATTGTCCAGTGGGACAATGGTAGAAGAACAAAC
TACAGAGTTGGACATCAGGGAGCATACGATCTTCTTGTGTTTGATGCCGCACCTGCCGGT
ATCAAGCATCCAAATAAACGATGCGATGGATGTGGTAGACGAGGCATCAAAGGCGTGAGG
TGGCATTGCACCCAATGTGAAGACTACGATCTGTGTACCAACTGCTACATGGCAAATGCG
CATAACATACAGCATAAATTCAAAAGATTTTTAACAAATAAATCAACCGGAGTCCTTATT
CCCAAGAGAGCCAAATGCACGAGATCTCAGGCTAAAGGTATATTTCCCGGTGCCAAAGTG
ATCAGAGGTTATGATTGGGTTTGGAGGGATCAAGACGGTGGCAATGGGAACATTGGTACA
GTTACAGATATACTAGGATGGAATAATGATACAGATGCAAGTGTTGCTTCAGTTACGTGG
CCTGGTAGATCAACAAAAAACGTATATCGAATGGGATATCGCGGAAAAGTCGATCTCAAA
TATGTTGTACCTGAAAAATCACCGACTTATCATTATAAGGAGCATTTACCTGTTCTAGGT
AAAGATGAACTAGACCCTAGTCTCGTGCCCCCACCAAAACCTTGTCCATTTACTGTGGGT
GATCGGGTGCGAGTCACCCTCCCTCTTGAGATCTTGAAGCCAATGCAGAAAGGTCACGGT
GGATGGAATCCGAAAATGGCAGAGCTCATTGGAACAGTGGGAACAGTACATCGTATCACT
CAAACCGGTGACATCAGAGTTCAGTATCCACTAGAATCACCAGCAGCTGCTACAACATCA
TCAGCGACACCGACGTCGTCTTCTGATACCAATCGATGGACTTTCAATCCAGCAGCTCTT
TCTCGTGTTGCTAGTGATTCGTCTAAACAAGAGCAACATTTCCTGGTCAAAGACCATGTC
CGAGTTATTGACGACAGCGAAAAAGTAAAAAGTTTACAATCAGCCGATCATGGAAATTGG
AACGAGAAAATGAACGAGATCATCGGGCAGAAAGGTATAATCATCGAAGTTTATCCAGAT
GGTGACGTCCGTGTTGAATTTTCACCCCAAAGACAATGGACATTTAATCCTGCTTGCTTG
CTACATGATCCACCTAAGCAGCGGAGCCCCATACTCAATGAAAATTACAATGGAGCTACG
TGCTCAACGCCCGCAATGGGATTAGGGCAATCAAAGAAAGGAAGTCCTGCGGAAATCATT
AACAAAGCAAGTAGGGGAGATCTGATTGGTTTGAAGCAGTTAATAAACAGCTATCCTTCA
ATGGTTGATGTAGAAACACCTAAAGGCAACACAGCACTTCAAATTGCAGCTGTTAAAGGT
CACATCGATGTTGTACGCTTTCTGCTGAAGAAGCGGGCAAGTATATCTAAAACTGATGCT
GCCGGCGACAATGCTTTGCATTTTGCTATGATTGGAAAAAACGAAGAATGCGTGCAAACA
ATATTAGAAGCATTGCCTCTGATGCAAATTAATTCAGTCAATAAGAAAAAAGAATCACCA
TTACACATTGCTGTAATCAGGGAGAATATCCAGTGGGCTAAACGTATATTGGAAATGGGT
TGTGATGTGAATTTGCAGGACAAAGATGGGGATACTGCCTGCCACATCTGCATCACAAAC
TCTGACAATCCTGATATGATGCGAGTTATCATGTCTCAACATAATTTCAATCCAGAATTG
ACCAATGCGCTTGGTTTTAATATTTTTCATCAAGCAGCTTTGAAAGGACGACTCGAATCA
GCTAAAGCAATACTAGAACGATATCCGAACATTGTTCGGGTTGCGAAAAAAGATGGCTAC
ACCGCTCTTCATCTGAGTGCTATAAATGGAAGAGAGGAGTTCACACAGATGCTTATTGAT
AAGTGCCTATTCCTGCTTGACATGACCGATGCCAAAAAGCAAACTGCGCTTCATCTAGCA
GCATTGGAAAATCATGTCAGCATTGTGAACGGGCTAGTGCGAGCAGGTGGGTCCGTCTCG
ATCATGACGTCAGACGGGAAAACCTGCTTGCATTGTGCAATAATGAACAAAACAGATCAG
TGCGAAGAAGAATCAAATGACTTTTCAACAATATCAACAGAATCGGCGATGAGTTCTGAG
TTTCCGCTTGATAATATTCTTCCTCGTTCTCCAGAATGGGAGCAGGTAAAAAACATTCTG
ATACGCAATCATTTGAAATCAAATCCGAACTTGCTGGAGCTTGCGATTGCGTGCTTTCTG
GTTTGTTCCGGAGCAGATCCAACAGTTACAGATCGTGAATTACATCGTAATGCATATGAA
CTGGTGGATAGCAATAATGCGAGAGCTGCATTGAAAGAATGCTTTGAAATCGCTAACCAA
GAAATTTTAGCCTCGGAATTCTCCAATTTTGCAAGCATGAAAGAGAATCCAAGTAAAGAA
TTTTCAACTTCCCCGTCACTCGCCCACGGTCATTCTTCTAAATCAAAGAATTTGTTTCGT
AAAACATTATCTGAATCTCTCTGCAACTCTCATTCCTCGTCCGATGAGTGTCGACACAGG
ACATCCTCTTTTCCACAGGAATGTATGTCTTGTGCTGATGAGCTAGCTTCGGTTGTATTT
AAACCTTGTGGACATAAAGTCGTTTGTTTAGAATGTTGTGTACGAATGAAGAAATGCATA
AAATGTCATGGAATGATCACAAGCAAAGTTGATAGTGAAGGAAATGAGATTCCGATTCCT
CTTCCCAGCGGTGGATTCAAATCTATAGCAAGTATGGAACATGAAACTGTGGTTCAACTT
GAGCAAAAGGTTCGGGAGTTACAAGAATCAAACCTTTGTAATATATGTATGGAACGATCA
ATTGACGCAGCGTTACGATGCGGCCACAGATTCTGCCAGAAATGTGCTTCATCTTTTCGA
CGATGTCCGATATGCAGAAAAAACATTACTGGCATTATAAGACTTTACTAG

InterProScan

ProSiteProfiles	Mib_Herc2 (IPR010606) - T[1-57] 23.401 - T[126-205] 25.2
Gene3D	Mib_Herc2_sf (IPR037252) - T[1-56] 2.4E-13 - T[121-210] 2.2E-22
SUPERFAMILY	Mib_Herc2_sf (IPR037252) - T[3-56] 6.93E-12 - T[130-202] 3.4E-19
Pfam	Mib_Herc2 (IPR010606) - T[3-54] 7.9E-16 - T[137-202] 5.1E-20
SMART	Znf_ZZ (IPR000433) - T[62-107] 8.9E-12
ProSiteProfiles	Znf_ZZ (IPR000433) - T[62-109] 13.625
Pfam	Znf_ZZ (IPR000433) - T[66-102] 8.8E-12
ProSitePatterns	Znf_ZZ (IPR000433) - T[68-95] .
SUPERFAMILY	Ankyrin_rpt-contain_sf (IPR036770) - T[441-721] 7.87E-55
CDD	Ankyrin_rpt-contain_dom (IPR020683) - T[463-591] 3.87546E-27 - T[601-721] 6.12875E-25
SMART	Ankyrin_rpt (IPR002110) - T[468-497] 5.3E-5 - T[501-532] 5.0 - T[536-565] 4.9 - T[569-600] 12.0 - T[604-633] 16.0 - T[638-668] 0.2 - T[672-701] 0.0081 - T[705-743] 2100.0
ProSiteProfiles	Ankyrin_rpt-contain_dom (IPR020683) - T[468-714] 49.021
ProSiteProfiles	Ankyrin_rpt (IPR002110) - T[468-500] 12.502 - T[536-568] 11.06 - T[638-661] 8.843 - T[672-704] 10.446
Pfam	Ankyrin_rpt-contain_dom (IPR020683) - T[575-661] 1.5E-7
Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[870-935] 6.1E-8 - T[948-1016] 2.4E-16
SMART	Znf_RING (IPR001841) - T[888-922] 1.0 - T[973-1005] 3.1E-6
ProSiteProfiles	Znf_RING (IPR001841) - T[888-923] 8.668 - T[973-1006] 12.799
ProSitePatterns	Znf_RING_CS (IPR017907) - T[987-996] .