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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S3553.g10321.07.t

Possible name(s)

RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S3553.g10321

Location

S3553 [3,497 / 4,157]

Sequences

Amino acid sequence

Length: 220

>Haaura.CG.MTP2014.S3553.g10321.07.p
MCPQSETKDGFELQFGTNHLGHFLMTNLLLDLVKKSPPARIIHVSSSAHYGWFGAAIHWD
DLNFTKNYDSIKAYGQSKLSNVLFSRELSKKLQGTGVTSNSLEPGAVKTDLQRHVGTHER
PSFRDRLMSFVTYFTRWSWSTPEKGAQTTIYLAVAPELAEVSGKYYADCKLKEESADAKK
DDFAERLWNISEELTGLKPKSEGERVKQSEEPQKTPEQSE

Nucleotide sequence

Length: 660

>Haaura.CG.MTP2014.S3553.g10321.07.t
ATGTGCCCCCAGTCTGAGACCAAGGATGGTTTCGAGCTGCAGTTTGGGACGAATCACTTG
GGTCATTTCTTGATGACGAATCTGTTGCTGGATTTGGTGAAGAAGAGTCCGCCTGCTCGC
ATCATACATGTATCTTCTAGTGCTCATTATGGATGGTTCGGAGCTGCGATTCATTGGGAT
GATTTGAATTTCACTAAGAATTACGATTCCATTAAGGCTTATGGCCAAAGCAAGTTGAGC
AATGTGCTTTTCTCTAGAGAGTTAAGCAAGAAGCTGCAAGGCACTGGTGTTACATCAAAT
AGTTTGGAACCTGGAGCTGTTAAGACGGATTTACAGAGGCATGTTGGAACACATGAGAGG
CCTTCGTTCAGGGACCGGTTGATGTCTTTTGTCACTTATTTCACAAGATGGTCGTGGAGC
ACCCCAGAAAAGGGGGCTCAAACCACGATTTACTTAGCAGTTGCCCCAGAGCTTGCAGAA
GTCAGCGGAAAGTATTACGCAGACTGCAAACTAAAAGAAGAGTCGGCCGATGCGAAGAAA
GATGATTTTGCAGAGAGATTGTGGAATATCAGCGAAGAGCTAACCGGGCTGAAACCGAAA
AGTGAGGGAGAACGAGTGAAACAGAGTGAGGAGCCGCAGAAAACTCCTGAGCAGAGTGAA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[5-171] 8.73E-27
PRINTS
SDR_fam (IPR002347) - T[33-49] 2.4E-5 - T[74-93] 2.4E-5 - T[95-112] 2.4E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 48.78 % 164 1.13E-49
RDH14_HUMAN 48.485 % 168 4.34E-51
RDH12_HUMAN 46.465 % 157 4.96E-47