Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Haaura.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S3553.g10321.05.t

Possible name(s)

RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S3553.g10321

Location

S3553 [3,281 / 4,103]

Sequences

Amino acid sequence

Length: 274

>Haaura.CG.MTP2014.S3553.g10321.05.p
DLAKREARVIIACRNMEKGEEAKKKIVEESKSENVVLKKLDLSSFESIREFAADINDTES
RLDVLINNAGVMMCPQSETKDGFELQFGTNHLGHFLMTNLLLDLVKKSPPARIIHVSSSA
HYGWFGAAIHWDDLNFTKNYDSIKAYGQSKLSNVLFSRELSKKLQGTGVTSNSLEPGAVK
TDLQRHVGTHERPSFRDRLMSFVTYFTRWSWSTPEKGAQTTIYLAVAPELAEVSGKYYAD
CKLKEESADAKKDDFAERLWNISEELTGLKPKSE

Nucleotide sequence

Length: 822

>Haaura.CG.MTP2014.S3553.g10321.05.t
GATTTGGCCAAGAGAGAAGCGAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTCGAAGAATCAAAATCAGAGAATGTTGTTTTGAAGAAACTC
GATCTCTCGTCGTTTGAATCTATCCGGGAATTCGCCGCTGACATCAACGATACCGAATCT
CGACTGGATGTTCTCATTAATAACGCAGGGGTGATGATGTGCCCCCAGTCTGAGACCAAG
GATGGTTTCGAGCTGCAGTTTGGGACGAATCACTTGGGTCATTTCTTGATGACGAATCTG
TTGCTGGATTTGGTGAAGAAGAGTCCGCCTGCTCGCATCATACATGTATCTTCTAGTGCT
CATTATGGATGGTTCGGAGCTGCGATTCATTGGGATGATTTGAATTTCACTAAGAATTAC
GATTCCATTAAGGCTTATGGCCAAAGCAAGTTGAGCAATGTGCTTTTCTCTAGAGAGTTA
AGCAAGAAGCTGCAAGGCACTGGTGTTACATCAAATAGTTTGGAACCTGGAGCTGTTAAG
ACGGATTTACAGAGGCATGTTGGAACACATGAGAGGCCTTCGTTCAGGGACCGGTTGATG
TCTTTTGTCACTTATTTCACAAGATGGTCGTGGAGCACCCCAGAAAAGGGGGCTCAAACC
ACGATTTACTTAGCAGTTGCCCCAGAGCTTGCAGAAGTCAGCGGAAAGTATTACGCAGAC
TGCAAACTAAAAGAAGAGTCGGCCGATGCGAAGAAAGATGATTTTGCAGAGAGATTGTGG
AATATCAGCGAAGAGCTAACCGGGCTGAAACCGAAAAGTGAG

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[2-243] 1.5E-47
Pfam
SDR_fam (IPR002347) - T[2-120] 6.8E-18
PRINTS
SDR_fam (IPR002347) - T[60-71] 1.1E-11 - T[60-71] 5.2E-6 - T[105-121] 1.1E-11 - T[111-119] 5.2E-6 - T[146-165] 1.1E-11 - T[146-165] 5.2E-6 - T[167-184] 1.1E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 44.203 % 226 4.66E-73
RDH13_HUMAN 50.365 % 241 9.24E-79
RDH12_HUMAN 47.778 % 226 3.77E-73