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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S3553.g10321.04.t

Possible name(s)

RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S3553.g10321

Location

S3553 [3,161 / 4,148]

Sequences

Amino acid sequence

Length: 298

>Haaura.CG.MTP2014.S3553.g10321.04.p
MAESKVKTIIKGFVNPEIKIPGKTVIITGANTGIGFVTAVDLAKREARVIIACRNMEKGE
EAKKKIVEESKSENVVLKKLDLSSFESIREFAADINDTESRLDVLINNAGVMMCPQSETK
DGFELQFGTNHLGHFLMTNLLLDLVKKSPPARIIHGQSKLSNVLFSRELSKKLQGTGVTS
NSLEPGAVKTDLQRHVGTHERPSFRDRLMSFVTYFTRWSWSTPEKGAQTTIYLAVAPELA
EVSGKYYADCKLKEESADAKKDDFAERLWNISEELTGLKPKSEGERVKQSEEPQKTPE

Nucleotide sequence

Length: 894

>Haaura.CG.MTP2014.S3553.g10321.04.t
ATGGCTGAAAGCAAAGTGAAGACGATTATCAAGGGTTTCGTGAATCCAGAGATCAAAATT
CCTGGCAAAACAGTGATCATAACAGGAGCTAACACTGGAATTGGTTTCGTAACCGCTGTA
GATTTGGCCAAGAGAGAAGCGAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTCGAAGAATCAAAATCAGAGAATGTTGTTTTGAAGAAACTC
GATCTCTCGTCGTTTGAATCTATCCGGGAATTCGCCGCTGACATCAACGATACCGAATCT
CGACTGGATGTTCTCATTAATAACGCAGGGGTGATGATGTGCCCCCAGTCTGAGACCAAG
GATGGTTTCGAGCTGCAGTTTGGGACGAATCACTTGGGTCATTTCTTGATGACGAATCTG
TTGCTGGATTTGGTGAAGAAGAGTCCGCCTGCTCGCATCATACATGGCCAAAGCAAGTTG
AGCAATGTGCTTTTCTCTAGAGAGTTAAGCAAGAAGCTGCAAGGCACTGGTGTTACATCA
AATAGTTTGGAACCTGGAGCTGTTAAGACGGATTTACAGAGGCATGTTGGAACACATGAG
AGGCCTTCGTTCAGGGACCGGTTGATGTCTTTTGTCACTTATTTCACAAGATGGTCGTGG
AGCACCCCAGAAAAGGGGGCTCAAACCACGATTTACTTAGCAGTTGCCCCAGAGCTTGCA
GAAGTCAGCGGAAAGTATTACGCAGACTGCAAACTAAAAGAAGAGTCGGCCGATGCGAAG
AAAGATGATTTTGCAGAGAGATTGTGGAATATCAGCGAAGAGCTAACCGGGCTGAAACCG
AAAAGTGAGGGAGAACGAGTGAAACAGAGTGAGGAGCCGCAGAAAACTCCTGAG

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[18-280] 5.25E-50
Pfam
SDR_fam (IPR002347) - T[23-160] 8.1E-24
PRINTS
SDR_fam (IPR002347) - T[24-41] 9.3E-15 - T[100-111] 9.3E-15 - T[155-174] 9.3E-15 - T[176-193] 9.3E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 41.042 % 232 4.11E-75
RDH13_HUMAN 46.906 % 244 1.1E-79
RDH12_HUMAN 44.3 % 234 6.19E-76