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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.216.v2....' > 
  2. Transcript 'KH2012:KH.C2.216.v1....' > 
  3. Transcript 'Boleac.CG.SB_v3.S2.g...' > 
  4. Transcript 'KH2012:KH.C2.216.v1....' > 
  5. Transcript 'Haaura.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S3389.g10240.01.t

Possible name(s)

SHQ1

Gene model

Haaura.CG.MTP2014.S3389.g10240

Location

S3389 [1,256 / 2,594]

Sequences

Amino acid sequence

Length: 442

>Haaura.CG.MTP2014.S3389.g10240.01.p
MITPKFELNQDDNFILIRVEAPYSRVSDAEVFVDEKVFKFYSKPYILNLHLQGCIVDDEH
SSCVYDSDKGEYFIKISKQVPGEYFEDLSLLTKFLSPTVQKLKTAPCIEVITGANSEVSY
DEEEDDLDWLSTEESETLTLTGYGVGFANQKFDAHAKLMEEADLVQIKNPEKLGRRERKM
LREAHEDERFDPHHYLADLFENDCIEEFVKLIPSWCERPYTEEFLESEKFALKNFANKEY
LIEKNNLQEVYLGLVDILYGCAYNWRFTGGEANVESAWTIKTLSSTLSWFDYCSDLPSKL
RSCYRRALVFPLFRSWTLAETCHRDVVAVLSHGKKCILKRLLETYAIFNECDPNYVINDL
FIKDYCIWIQKANSKTIRSLAAALKTVKITKENVGFELVELENAAKVVLSEENGNEKSSH
DASDHDADKLSDQIEKISLES*

Nucleotide sequence

Length: 1,338

>Haaura.CG.MTP2014.S3389.g10240.01.t
ATGATTACTCCTAAATTCGAACTCAATCAAGATGATAATTTCATTTTGATTCGTGTGGAA
GCACCATATTCGAGGGTTTCAGACGCAGAAGTGTTCGTCGACGAGAAGGTATTCAAATTC
TATTCGAAACCTTATATCCTAAACCTCCATCTTCAAGGATGCATAGTTGACGATGAGCAT
TCTAGTTGTGTTTACGATTCAGATAAAGGAGAATATTTCATAAAGATATCAAAACAAGTA
CCTGGGGAGTATTTTGAAGACCTGAGTCTGCTCACAAAATTCCTCTCCCCAACTGTGCAG
AAACTGAAAACTGCACCGTGTATAGAAGTTATCACTGGCGCAAACAGTGAAGTATCATAT
GATGAAGAAGAAGACGACCTGGATTGGCTCTCTACCGAAGAGAGTGAGACCTTAACTCTT
ACAGGCTATGGAGTCGGCTTCGCGAATCAAAAATTCGATGCGCATGCCAAACTAATGGAG
GAGGCTGATCTCGTACAAATCAAAAATCCCGAAAAACTAGGCAGGAGGGAGAGGAAAATG
CTGAGAGAAGCTCACGAAGATGAGAGATTTGATCCCCACCATTACCTAGCGGATCTGTTC
GAGAATGATTGTATTGAGGAATTTGTGAAATTGATACCGTCATGGTGCGAGCGACCATAC
ACAGAAGAATTTCTTGAAAGTGAAAAGTTTGCTTTGAAAAACTTTGCAAACAAAGAATAT
CTGATTGAAAAAAATAATTTGCAAGAAGTTTATTTGGGACTTGTTGACATTCTTTATGGC
TGTGCATATAACTGGAGGTTCACCGGAGGTGAAGCTAATGTAGAGTCTGCATGGACCATT
AAAACCCTGAGTTCAACTCTGTCATGGTTTGACTACTGCTCTGATTTGCCGAGCAAGTTA
AGATCATGCTACAGGCGAGCACTCGTGTTTCCTCTCTTCAGGAGTTGGACTCTTGCGGAA
ACTTGTCATAGGGATGTTGTGGCTGTATTAAGTCATGGTAAAAAATGCATCCTCAAACGG
TTACTGGAAACATATGCTATTTTTAACGAGTGCGATCCAAATTATGTAATTAATGATTTG
TTCATCAAAGACTATTGCATATGGATTCAAAAGGCGAACTCCAAGACCATCAGGTCCCTT
GCTGCTGCTTTGAAAACTGTCAAAATTACAAAAGAAAATGTTGGCTTTGAACTTGTAGAG
TTAGAAAATGCAGCTAAAGTAGTTCTGAGTGAAGAAAATGGTAATGAAAAATCTTCACAT
GATGCGAGTGATCATGATGCGGATAAACTATCAGACCAGATAGAAAAAATCAGTCTTGAA
TCATAGGATAAGGTTTAA

InterProScan

ProSiteProfiles
CS_dom (IPR007052) - T[1-89] 12.073
Gene3D
HSP20-like_chaperone (IPR008978) - T[1-132] 5.9E-33
SUPERFAMILY
HSP20-like_chaperone (IPR008978) - T[3-86] 1.6E-6
Pfam
SHQ1 (IPR007009) - T[223-392] 1.6E-59

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SHQ1_HUMAN 40.482 % 297 4.46E-95