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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S327.g04327.01.t

Possible name(s)

SP7; SP8; SP9

Gene model

Haaura.CG.MTP2014.S327.g04327

Location

S327 [20,561 / 25,179]

Sequences

Amino acid sequence

Length: 414

>Haaura.CG.MTP2014.S327.g04327.01.p
MSMSAPTASLLQAPGAPGSGGIGDYYLGVGNSILSHHHASAFVSKMQHNALAMNQSVSPM
SPANTQSNTGSGSPIGSNCSTTSSPYHITPPPNSPPVMMYPQSTLSSVTSLVSSTSPSRR
LSNGINNFSGFSSPHSTKPYSTWYQKPIENDISTSSIPNVTATYATNSNSNISGSSSNFV
TSPTAAYAHTNPWEAAALHTNTWLEMQNLQHHHNQMAAAYSTDYHHPFQASSLTSLSSLS
SAAAAQHHNPYETFKPVLPGTAGVYNDSAQTLPPMLAATQLPTASRSSRRYSGRTVCECP
NCQEAERLGPAAASYKPKVHSCHIPGCGKVYNKTSHLKAHLRWHTGEKRFACPVCNKRFQ
RSDHLSKHVKSHTLAAQESAASTTASGKSKAIKAEPVSKASSAGRDSVNELAK*

Nucleotide sequence

Length: 1,347

>Haaura.CG.MTP2014.S327.g04327.01.t
TTGTATAGAATACGCGTTTCCCGTATTCCAGGAATTCTTCAGGTGCTATATTATTGGAGT
GAATTTCATCGCTACTCTGTCAAGTCACGGTATATATTATAAAGTATGAGCATGAGTGCA
CCTACAGCTTCGTTACTGCAGGCACCCGGAGCGCCAGGAAGCGGCGGCATTGGCGATTAT
TATTTAGGAGTTGGAAATTCGATTCTATCCCACCACCATGCCAGCGCATTCGTGAGTAAA
ATGCAACACAACGCTCTGGCAATGAATCAGTCAGTTTCTCCAATGTCTCCAGCAAATACT
CAATCTAACACAGGATCTGGTTCTCCAATAGGAAGCAACTGTTCAACAACATCATCACCC
TATCATATTACCCCTCCTCCCAACTCTCCTCCAGTTATGATGTATCCCCAGTCCACATTG
TCATCTGTCACTTCATTGGTATCATCCACCTCACCATCAAGAAGACTCTCTAACGGCATC
AACAACTTTAGCGGGTTCAGCAGTCCTCACTCGACCAAACCTTACAGCACTTGGTATCAA
AAACCGATCGAAAATGACATATCAACAAGTTCTATCCCAAATGTGACAGCGACGTATGCG
ACCAACAGCAACTCAAACATCAGCGGTTCGTCTTCAAATTTTGTAACTTCACCTACTGCA
GCTTATGCTCACACCAATCCTTGGGAAGCTGCAGCACTTCACACAAATACTTGGCTTGAG
ATGCAAAACCTACAACATCATCATAATCAGATGGCAGCGGCCTATTCCACCGACTACCAT
CACCCTTTCCAAGCATCTTCGCTAACTTCTCTCAGCTCATTATCTTCCGCAGCAGCAGCT
CAACATCACAATCCATATGAAACTTTCAAACCAGTATTGCCCGGTACAGCAGGCGTATAC
AACGACTCTGCCCAGACATTACCTCCTATGCTTGCGGCAACACAGCTACCCACGGCCTCG
CGAAGTTCCCGTCGTTACTCCGGAAGGACTGTTTGCGAATGTCCCAATTGTCAAGAAGCT
GAACGTTTAGGTCCCGCCGCTGCATCGTACAAGCCCAAGGTCCACAGCTGCCATATTCCT
GGATGTGGAAAAGTTTACAACAAGACCTCCCATTTGAAAGCTCACTTGAGATGGCATACA
GGAGAGAAACGGTTCGCCTGCCCTGTTTGCAACAAGCGATTTCAACGCAGCGATCATCTT
AGCAAGCATGTGAAATCACACACCCTGGCGGCACAGGAATCCGCAGCATCCACGACGGCA
TCGGGCAAATCCAAAGCCATCAAGGCGGAGCCAGTTTCCAAAGCATCCTCTGCCGGTCGT
GACTCTGTCAACGAATTAGCTAAGTGA

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[318-372] 2.33E-12
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[320-349] 13.297 - T[350-373] 11.926
SMART
Znf_C2H2_type (IPR013087) - T[320-344] 1.5 - T[350-372] 7.4E-4
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[322-344] . - T[352-372] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SP8_HUMAN 47.162 % 164 9.92E-46
SP9_HUMAN 37.241 % 159 5.12E-44
SP7_HUMAN 52.672 % 130 1.25E-33