- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2.g00097.01.t
Possible name(s)
LTBP1; LTBP2; LTBP4
Gene model
Location
S2 [257,879 / 266,502]
Amino acid sequence
Length: 1,015
>Haaura.CG.MTP2014.S2.g00097.01.p
FFMIFAMCLLKVSSVECQSSVAPFETEYKNITITVRNQTLVIRVPASLTDQILEFINAIV
LESNITMIDIDVCVSEIDDCTVNETCVNIVGIQHMCLCKKGFSKSNNSSQCTDTDECASG
NYTCHVNATCENKVGGYDCVCGQNFTGDGTVCTIIDACTIYQCNETENCKVVDEAATCEC
KDGYESESDEDSYIDECAEIEDMSGSGDSDIIIIVERASVTSTSTTSSSICPDNERCVNT
PGNYFCVCEMGFGRNGTTCTDIDECASNPCHSLADCSNFDGSFQCECKSPFIGNGSTCGC
ENGYKVNDTVTNCTDIDECDARTFSCPAMSFCMNSEGSYTCPCNLGFSLNGSTCIDFDEC
TSNPCHRLANCTNTHGSFQCACKSAFFGDGSASCGCQNGYKINDAETDCIDENECDNGTH
SCTGEQECKNTNGSFTCDCSFFNVNGQCLDRNTGIIVTTDTGGLSRKKRSVTSCDLLPGE
LASVISEHLEEFVEKNTGSKINVTVTVLSASGTYTFIVSTDAEWINHVRVAISELSSIGV
NDTCTVTFRGLLYTKPLNYVGMVSNGTLLNDDICDQIAESVQNQFISKFNETSIVTCNFT
GSQLSISVRDTFAVLNDLNEAVIMAVISQEFNISDIDECVDDVCLEECTNAIGSFTCSCP
NGTFDLDVTNPGNTCVHPIITTCGPDGIRAEVYIAYFENHGVPLSVIHLYNKSCSGTVGS
QFLTFDFKFDECDTRKEHGDNTVVYFNAVTNKDYGVYVYSPSFTAELRCSYSNEFNSTDS
NDTTSAIITSTILIVNPSTGNGDLKVTLSLLKDGDPLQTTDNLQVGDLIQIKVTQTGPGL
FMKVTTCWATPTSDPTNNPYEFITDECPTSDSVTVNIVRNGNNDTALIEVQAFSFADTSS
ELFLHCQVKVCENPCQKNCGTSGRRRRQIIDSQEPENMVSIGPIQVNGRTADTDDTLVIG
TSDNDEQVTNSNSAVIGTSVSLGIAICVIIAFVVYRKFKKDPSREAAYHMTEWN*
Nucleotide sequence
Length: 3,045
>Haaura.CG.MTP2014.S2.g00097.01.t
TTTTTCATGATCTTTGCGATGTGCCTGCTTAAGGTATCTTCGGTAGAGTGTCAATCAAGT
GTCGCGCCTTTTGAAACTGAATACAAAAATATAACTATTACAGTTCGTAACCAAACACTG
GTGATTAGAGTTCCAGCATCTTTAACTGATCAGATATTGGAATTCATCAACGCCATAGTT
CTGGAAAGCAACATAACGATGATTGATATCGACGTATGTGTTTCTGAAATTGATGACTGC
ACGGTTAACGAGACATGTGTGAATATCGTAGGAATTCAGCATATGTGCCTTTGCAAGAAA
GGATTTTCAAAGTCAAACAATTCAAGTCAATGTACTGATACTGACGAATGTGCCTCCGGA
AATTACACATGTCATGTGAATGCAACCTGTGAAAATAAGGTCGGAGGCTATGATTGTGTT
TGTGGTCAAAATTTTACAGGAGACGGAACTGTGTGTACAATAATAGATGCTTGCACCATC
TACCAGTGCAATGAAACGGAAAACTGCAAAGTTGTTGATGAAGCTGCAACATGTGAATGC
AAAGATGGATATGAATCAGAATCAGATGAGGATTCTTACATTGATGAATGTGCTGAAATC
GAAGATATGAGTGGTTCCGGAGACAGTGATATCATTATTATAGTTGAAAGAGCTTCTGTG
ACCAGCACTAGTACTACTTCCTCGTCCATATGTCCTGACAACGAACGTTGTGTAAATACT
CCTGGCAATTATTTTTGTGTTTGTGAAATGGGATTTGGTCGAAATGGAACCACATGCACA
GACATTGATGAATGCGCATCCAATCCCTGCCATAGCCTCGCTGATTGTTCTAACTTCGAC
GGTTCTTTCCAGTGTGAATGCAAGTCGCCATTTATTGGAAATGGATCTACTTGTGGATGT
GAAAATGGATACAAGGTTAATGACACAGTCACAAACTGCACAGATATTGATGAGTGTGAT
GCAAGAACTTTCTCCTGCCCTGCAATGTCTTTTTGTATGAACTCAGAAGGATCGTATACT
TGCCCATGCAATCTTGGTTTCAGCTTAAATGGATCGACCTGTATTGACTTTGATGAATGC
ACATCGAATCCCTGCCATCGGCTAGCCAATTGTACTAACACTCACGGTTCATTCCAGTGT
GCATGCAAGTCAGCATTTTTTGGAGATGGATCAGCTAGTTGTGGTTGTCAAAATGGATAC
AAGATTAATGATGCAGAAACAGACTGCATAGACGAAAATGAATGTGACAATGGAACGCAT
AGCTGTACTGGCGAACAGGAATGCAAGAACACCAACGGTTCATTCACTTGCGACTGTTCC
TTTTTCAATGTTAATGGACAATGTTTAGATAGAAACACAGGCATTATTGTAACCACAGAC
ACCGGGGGTTTGAGCCGCAAAAAACGGAGTGTTACTTCATGTGACTTGCTTCCAGGAGAG
TTGGCATCTGTTATAAGCGAACACCTAGAAGAATTTGTTGAGAAAAATACCGGATCAAAA
ATAAATGTTACTGTGACAGTGCTATCAGCCAGTGGTACATATACCTTTATTGTTTCCACG
GATGCAGAATGGATAAACCATGTCCGTGTTGCAATCAGTGAATTATCAAGCATCGGGGTC
AATGACACATGTACCGTAACGTTTCGGGGACTTCTGTATACGAAACCTCTAAACTATGTA
GGCATGGTATCGAATGGAACCTTACTGAATGACGATATTTGCGACCAGATTGCTGAATCT
GTTCAAAATCAATTCATCAGCAAATTTAACGAAACGAGTATCGTTACTTGTAATTTTACT
GGCAGTCAGTTGTCTATTTCTGTTCGTGATACATTCGCTGTACTGAACGATTTGAATGAA
GCTGTGATCATGGCTGTCATCAGTCAAGAATTCAATATTTCAGACATTGATGAATGTGTT
GATGATGTCTGTCTCGAAGAATGCACAAACGCTATTGGTTCCTTTACCTGTAGTTGCCCG
AATGGTACTTTTGACTTAGATGTGACCAACCCTGGCAACACCTGCGTTCACCCTATCATA
ACTACATGCGGCCCAGATGGTATTCGTGCAGAGGTGTACATTGCATATTTTGAAAATCAT
GGCGTGCCACTCAGCGTTATTCATCTGTACAATAAAAGCTGTTCGGGAACTGTTGGTTCT
CAATTCTTAACTTTCGACTTCAAATTTGATGAATGTGATACGAGGAAGGAGCATGGGGAC
AACACTGTTGTTTACTTCAATGCTGTAACGAATAAAGACTATGGCGTGTATGTGTACAGT
CCCTCGTTCACAGCTGAACTGAGATGTAGTTATTCCAATGAATTTAATAGCACCGATTCG
AATGACACTACTTCTGCCATAATCACATCAACCATTCTCATTGTAAACCCTTCTACTGGT
AATGGTGATCTTAAGGTAACGTTGTCTCTTCTTAAGGATGGTGACCCTCTGCAGACAACC
GATAATCTCCAAGTTGGAGATCTAATACAGATCAAGGTTACGCAAACTGGCCCAGGACTG
TTTATGAAAGTGACAACATGTTGGGCCACACCTACAAGTGATCCTACCAACAATCCTTAT
GAATTTATCACGGATGAATGTCCGACCAGTGACAGCGTAACCGTAAACATAGTACGTAAT
GGAAATAACGATACCGCTCTTATCGAAGTTCAAGCGTTTTCATTTGCTGATACCTCCTCC
GAACTCTTCCTACACTGCCAAGTAAAAGTCTGTGAAAATCCATGCCAAAAGAACTGCGGA
ACAAGTGGAAGGCGAAGGCGTCAGATTATTGATTCACAGGAACCTGAAAATATGGTCTCA
ATTGGTCCAATTCAGGTCAATGGACGAACAGCAGATACCGATGACACGCTAGTCATTGGT
ACGTCAGATAACGATGAGCAAGTTACAAACTCGAACTCTGCGGTGATTGGCACGTCAGTT
TCTCTGGGTATTGCCATTTGTGTCATTATTGCCTTCGTTGTTTATCGCAAGTTCAAAAAG
GATCCAAGCAGAGAAGCCGCTTATCACATGACAGAATGGAATTAG
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[69-108] 9.234 - T[113-153] 13.001 - T[222-260] 7.455 - T[261-299] 14.744 - T[315-355] 8.928 - T[356-392] 14.34 - T[411-449] 8.758 - T[635-669] 8.311 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[69-111] 6.1E-4 - T[113-152] 5.4E-8 - T[228-259] 3.2E-4 - T[261-313] 5.3E-5 - T[315-354] 1.3E-8 - T[356-386] 3.7E-7 - T[411-440] 9.5E-5 - T[635-663] 3.0E-4 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[69-112] 0.17 - T[113-153] 9.1E-6 - T[194-260] 0.0017 - T[261-299] 2.9E-7 - T[315-355] 1.9E-8 - T[356-395] 2.1E-5 - T[411-449] 0.05 - T[635-676] 8.6E-8 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[70-186] 2.82E-6 - T[229-362] 2.35E-13 - T[327-450] 8.32E-11 |
| SMART |
EGF-like_dom (IPR000742) - T[72-112] 16.0 - T[116-153] 0.027 - T[157-198] 76.0 - T[228-260] 110.0 - T[264-299] 0.016 - T[318-355] 0.42 - T[359-395] 0.48 - T[638-676] 0.046 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[113-139] . - T[356-380] . - T[411-437] . - T[635-657] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[130-141] . - T[237-248] . - T[276-287] . - T[332-343] . - T[371-382] . - T[428-439] . - T[648-659] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[246-259] . - T[341-354] . |
| SMART |
ZP_dom (IPR001507) - T[682-922] 2.4E-20 |
| ProSiteProfiles |
ZP_dom (IPR001507) - T[682-926] 29.537 |
| Pfam |
ZP_dom (IPR001507) - T[683-919] 1.1E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LTBP1_HUMAN | 31.54 % | 143 | 1.32E-34 |
| LTBP4_HUMAN | 31.351 % | 135 | 5.83E-32 |
| LTBP2_HUMAN | 30.412 % | 139 | 2.76E-33 |
