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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S2.g00088.01.t

Possible name(s)

SNX10; SNX11; SNX3

Gene model

Haaura.CG.MTP2014.S2.g00088

Location

S2 [211,132 / 212,495]

Sequences

Amino acid sequence

Length: 291

>Haaura.CG.MTP2014.S2.g00088.01.p
MLKHSEAQCHLRHECISELFKYFYRSSGFRKTFAMDEANKGTYEKNKKTVFKEFMKAKVS
DPLILHPEHESAYVVYNVQIMTNSLSFTIPHSLVRRRYSDFEWLRKRLCNIPCMCDPPSL
PMKSHWWNFDSEFLQRRSKQLETFVVRVLKETLFLSCSALHLFLQSELTTKEMMECIKEG
GVNEAILTSRCAVSSQHDRILSFCGNDFVKEHFTTVVWRVEYESLKKIESIHSSDDEEEI
THEEDSQVKTIEEDPYSLDRPDKLSSENYLPWFEFWKILNEATEVPNARN*

Nucleotide sequence

Length: 873

>Haaura.CG.MTP2014.S2.g00088.01.t
ATGCTAAAACATAGCGAAGCTCAGTGTCACTTACGTCACGAGTGCATTAGCGAATTATTC
AAGTATTTTTACAGGAGCTCAGGGTTCCGAAAGACCTTCGCGATGGATGAAGCAAATAAA
GGTACTTATGAGAAGAATAAGAAGACTGTATTCAAGGAATTCATGAAGGCTAAAGTTAGC
GATCCATTAATCCTACATCCAGAACACGAATCTGCCTACGTGGTTTACAACGTGCAAATT
ATGACGAACAGTCTTTCTTTCACCATTCCGCATTCTCTTGTTAGACGTCGATATTCTGAT
TTTGAGTGGCTGAGGAAGCGATTATGTAATATCCCTTGTATGTGTGATCCGCCCTCCTTA
CCAATGAAATCGCATTGGTGGAATTTCGATTCAGAATTTCTCCAGCGTAGAAGTAAACAA
CTTGAAACATTTGTCGTAAGGGTTTTGAAAGAGACGCTATTTCTTTCGTGTAGTGCATTG
CATTTGTTTCTTCAGTCTGAGCTGACCACCAAAGAAATGATGGAATGCATTAAGGAGGGA
GGCGTGAACGAAGCTATACTTACCTCGAGGTGCGCCGTTTCTTCACAACACGACAGAATT
CTTAGCTTCTGTGGGAACGATTTCGTTAAAGAACATTTTACCACCGTGGTGTGGAGGGTT
GAGTACGAAAGCTTGAAGAAAATCGAGAGCATACATAGCAGCGATGACGAAGAAGAGATT
ACGCACGAGGAAGATTCACAAGTTAAGACTATAGAGGAGGATCCTTATTCTCTTGATCGC
CCTGACAAATTGTCGTCAGAGAACTATTTACCTTGGTTTGAATTCTGGAAAATCTTAAAC
GAAGCAACCGAAGTTCCTAATGCCAGGAACTAG

InterProScan

Gene3D
PX_dom_sf (IPR036871) - T[46-192] 5.5E-30
PANTHER
SNX11 (IPR028655) - T[52-246] 7.2E-32
SUPERFAMILY
PX_dom_sf (IPR036871) - T[54-167] 3.79E-25
ProSiteProfiles
Phox (IPR001683) - T[54-170] 13.474
SMART
Phox (IPR001683) - T[57-167] 2.2E-9
Pfam
Phox (IPR001683) - T[67-166] 3.3E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNX11_HUMAN 38.129 % 95.5 4.3E-23