- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2.g00085.02.t
Possible name(s)
HERC2; RCC2
Gene model
Location
S2 [192,236 / 195,217]
Amino acid sequence
Length: 496
>Haaura.CG.MTP2014.S2.g00085.02.p
MPRRKNDPNKIETPAVKKSKKETIESLAETEDSESSVKLPLPTEEGELVICGGVNWSLNG
RKKPRKGDEKYAKVGRNLFKPHRYKALSGIKITRVISGCLANHNLFITKEGKVYSWGRNE
FGQLGHGDTDRYDLPKQIESLNHLKIVHAAAGRNHTLCLTESGKVYSFGENTQGQLGLGV
HGLTIPSPTQLAYRGKPIVDISCGAEFSMVVDTDGSVHSFGCPEYGQLGNNTDGKYFVSG
NKLAYDSVFTPFRIPLWTEKTRSNQVLPISDVKITGVACGANHTIAVDSKKRIFTWGFGG
YGRLGHSEQKDEHTPRLVEAFNREMRGAVKIYAGSSFSLAVNETGVTMFWGLQGSISSRE
TTMYPKPVQDLQGWNVKSIGCGQRHIVVAADESLIVWGVGTSNGELGLGESRKSSANPQI
MKAMEGLMPLEISCGFVHTLIKVRCNNEEETGKLSSLPEYDPFFDVVLHVSYSSTSLLVL
ERVSLLHAIKWYRSS*
Nucleotide sequence
Length: 1,590
>Haaura.CG.MTP2014.S2.g00085.02.t
ATGCCTCGCAGAAAAAATGACCCGAATAAAATTGAAACTCCGGCCGTTAAAAAGTCGAAG
AAAGAAACTATTGAGTCGCTTGCAGAAACCGAAGACAGCGAAAGCAGTGTGAAACTTCCT
CTACCAACAGAAGAAGGTGAATTGGTGATTTGCGGCGGAGTTAACTGGAGTTTGAATGGA
CGGAAAAAACCAAGGAAGGGTGATGAAAAATATGCTAAAGTCGGAAGGAATCTATTCAAA
CCTCATCGCTACAAAGCATTGTCCGGCATCAAAATTACAAGAGTGATAAGTGGATGCCTT
GCAAATCATAATTTGTTCATCACTAAGGAAGGAAAAGTTTATTCTTGGGGTCGAAATGAA
TTTGGACAGCTTGGCCACGGTGACACGGACAGGTACGACCTTCCAAAACAGATCGAGTCA
TTGAACCATTTGAAAATAGTTCATGCTGCTGCTGGACGCAATCATACTTTGTGCCTCACG
GAGTCTGGCAAAGTATATTCCTTTGGTGAAAATACGCAAGGCCAGTTGGGATTAGGTGTT
CATGGATTAACGATTCCCAGCCCAACTCAACTTGCCTACCGTGGAAAACCAATCGTAGAT
ATTTCCTGCGGTGCAGAGTTCAGCATGGTTGTTGACACCGATGGATCGGTCCACTCATTC
GGATGCCCCGAATATGGCCAACTCGGCAACAACACAGATGGAAAATACTTTGTATCTGGA
AATAAGCTTGCGTACGACAGCGTCTTCACGCCATTTCGAATTCCTCTTTGGACAGAAAAG
ACGAGAAGTAATCAAGTGTTGCCTATTTCTGATGTGAAAATCACCGGTGTAGCCTGCGGA
GCAAATCATACTATTGCAGTCGATTCTAAGAAAAGGATTTTCACTTGGGGTTTCGGTGGC
TACGGAAGGCTGGGTCATTCGGAACAGAAAGATGAACACACTCCCAGATTGGTCGAAGCG
TTCAATCGTGAAATGAGGGGAGCTGTCAAAATATATGCTGGTTCTTCATTCTCGTTGGCT
GTAAATGAAACAGGCGTTACTATGTTCTGGGGCTTACAAGGAAGCATCAGCAGCCGTGAA
ACTACCATGTATCCAAAGCCAGTTCAAGATCTTCAAGGCTGGAACGTGAAAAGTATCGGA
TGTGGGCAAAGGCACATTGTGGTTGCGGCGGATGAAAGTTTGATCGTGTGGGGAGTCGGT
ACTAGCAATGGTGAACTGGGTCTTGGTGAATCTCGCAAGAGCAGCGCCAATCCACAGATC
ATGAAAGCCATGGAAGGTCTCATGCCTCTTGAGATATCCTGTGGTTTTGTGCATACATTG
ATCAAAGTTCGATGTAACAACGAGGAGGAAACAGGCAAGCTTTCTTCCTTGCCTGAGTAT
GACCCATTTTTTGATGTTGTTCTTCACGTTTCGTACTCTTCCACGAGTCTTTTGGTACTA
GAACGAGTGAGCCTGCTTCATGCTATTAAATGGTACAGATCAAGTTAAGTTCACCTCATT
AAAAACCATGCAGACTTAGGCACAAGTCGTTTATATTATTCTTTAGATAATTACCGCTAC
TGTTATACTGCCACTACCATAAAAACTTAC
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[6-245] 1.3E-51 - T[246-460] 2.4E-36 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[43-446] 1.66E-84 |
| Pfam |
Reg_chr_condens (IPR000408) - T[110-159] 3.1E-17 - T[162-211] 9.7E-12 - T[214-287] 3.7E-10 - T[292-341] 6.9E-10 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[111-162] 18.202 - T[163-214] 14.383 - T[215-290] 12.293 - T[291-344] 12.715 - T[392-445] 10.725 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[112-128] 3.0E-15 - T[146-159] 3.0E-15 - T[165-181] 3.0E-15 - T[277-293] 3.0E-15 - T[293-307] 3.0E-15 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[149-159] . - T[277-287] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC2_HUMAN | 28.344 % | 133 | 8.84E-33 |
| HERC4_HUMAN | 29.268 % | 124 | 3.26E-30 |
| RCC2_HUMAN | 51.259 % | 474 | 5.07E-164 |
