- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2.g00085.01.t
Possible name(s)
HERC2; RCC2
Gene model
Location
S2 [192,236 / 194,956]
Amino acid sequence
Length: 446
>Haaura.CG.MTP2014.S2.g00085.01.p
MPRRKNDPNKIETPAVKKSKKETIESLAETEDSESSVKLPLPTEEGELVICGGVNWSLNG
RKKPRKGDEKYAKVGRNLFKPHRYKALSGIKITRVISGCLANHNLFITKEGKVYSWGRNE
FGQLGHGDTDRYDLPKQIESLNHLKIVHAAAGRNHTLCLTESGKVYSFGENTQGQLGLDI
SCGAEFSMVVDTDGSVHSFGCPEYGQLGNNTDGKYFVSGNKLAYDSVFTPFRIPLWTEKT
RSNQVLPISDVKITGVACGANHTIAVDSKKRIFTWGFGGYGRLGHSEQKDEHTPRLVEAF
NREMRGAVKIYAGSSFSLAVNETGVTMFWGLQGSISSRETTMYPKPVQDLQGWNVKSIGC
GQRHIVVAADESLIVWGVGTSNGELGLGESRKSSANPQIMKAMEGLMPLEISCGFVHTLI
KVRCNNEEETGKLSSLPEYDPVVAQ*
Nucleotide sequence
Length: 1,338
>Haaura.CG.MTP2014.S2.g00085.01.t
ATGCCTCGCAGAAAAAATGACCCGAATAAAATTGAAACTCCGGCCGTTAAAAAGTCGAAG
AAAGAAACTATTGAGTCGCTTGCAGAAACCGAAGACAGCGAAAGCAGTGTGAAACTTCCT
CTACCAACAGAAGAAGGTGAATTGGTGATTTGCGGCGGAGTTAACTGGAGTTTGAATGGA
CGGAAAAAACCAAGGAAGGGTGATGAAAAATATGCTAAAGTCGGAAGGAATCTATTCAAA
CCTCATCGCTACAAAGCATTGTCCGGCATCAAAATTACAAGAGTGATAAGTGGATGCCTT
GCAAATCATAATTTGTTCATCACTAAGGAAGGAAAAGTTTATTCTTGGGGTCGAAATGAA
TTTGGACAGCTTGGCCACGGTGACACGGACAGGTACGACCTTCCAAAACAGATCGAGTCA
TTGAACCATTTGAAAATAGTTCATGCTGCTGCTGGACGCAATCATACTTTGTGCCTCACG
GAGTCTGGCAAAGTATATTCCTTTGGTGAAAATACGCAAGGCCAGTTGGGATTAGATATT
TCCTGCGGTGCAGAGTTCAGCATGGTTGTTGACACCGATGGATCGGTCCACTCATTCGGA
TGCCCCGAATATGGCCAACTCGGCAACAACACAGATGGAAAATACTTTGTATCTGGAAAT
AAGCTTGCGTACGACAGCGTCTTCACGCCATTTCGAATTCCTCTTTGGACAGAAAAGACG
AGAAGTAATCAAGTGTTGCCTATTTCTGATGTGAAAATCACCGGTGTAGCCTGCGGAGCA
AATCATACTATTGCAGTCGATTCTAAGAAAAGGATTTTCACTTGGGGTTTCGGTGGCTAC
GGAAGGCTGGGTCATTCGGAACAGAAAGATGAACACACTCCCAGATTGGTCGAAGCGTTC
AATCGTGAAATGAGGGGAGCTGTCAAAATATATGCTGGTTCTTCATTCTCGTTGGCTGTA
AATGAAACAGGCGTTACTATGTTCTGGGGCTTACAAGGAAGCATCAGCAGCCGTGAAACT
ACCATGTATCCAAAGCCAGTTCAAGATCTTCAAGGCTGGAACGTGAAAAGTATCGGATGT
GGGCAAAGGCACATTGTGGTTGCGGCGGATGAAAGTTTGATCGTGTGGGGAGTCGGTACT
AGCAATGGTGAACTGGGTCTTGGTGAATCTCGCAAGAGCAGCGCCAATCCACAGATCATG
AAAGCCATGGAAGGTCTCATGCCTCTTGAGATATCCTGTGGTTTTGTGCATACATTGATC
AAAGTTCGATGTAACAACGAGGAGGAAACAGGCAAGCTTTCTTCCTTGCCTGAGTATGAC
CCAGTAGTTGCTCAATAA
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[6-178] 3.7E-36 - T[179-428] 2.6E-46 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[43-425] 2.09E-79 |
| Pfam |
Reg_chr_condens (IPR000408) - T[110-159] 2.7E-17 - T[193-266] 3.1E-10 - T[271-320] 6.0E-10 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[111-162] 18.202 - T[194-269] 12.293 - T[270-323] 12.715 - T[371-424] 10.725 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[112-128] 5.3E-17 - T[146-159] 5.3E-17 - T[165-181] 5.3E-17 - T[256-272] 5.3E-17 - T[272-286] 5.3E-17 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[149-159] . - T[256-266] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC2_HUMAN | 27.389 % | 123 | 8.37E-30 |
| HERC3_HUMAN | 28.125 % | 115 | 2.99E-27 |
| RCC2_HUMAN | 49.199 % | 442 | 1.36E-152 |
