- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2.g00071.01.t
Possible name(s)
CSTF2; CSTF2T; NCL
Gene model
Location
S2 [130,996 / 133,825]
Amino acid sequence
Length: 548
>Haaura.CG.MTP2014.S2.g00071.01.p
MVQMKTGKSKAKKEVKKPTKPVVAAKEESSEEEESDSEEEEKVVTKATPKANNKKGKAVA
KQESEEEDSDEDDDDSEEEETKAPSKTTKKAVSKKAAKAESSDDDDDDDEDDSDEEVEKK
AKKNGTKEKVEDDEDDDDDDDDDDDEDEEEDKEKMEIFQVSKPDKKRKQNDDKTENAKKA
KSDETVTMGFSNLPEGTDDDSFNKFLKSKGIQCISCRANYSRGRAFVDISADDKGKAIGL
NQVEWKGSELEVAEDAKRSQQAGGGVNMSDRDARTMFVRNLPYSATEEEISELFENVEEV
RILIDRQTGNSKGICFVQFDTPESLKTNMEKKDGVELQGRSLYVDYAGNKGGGGGGAGGG
FGGGGDRRRSSGGGQEGKTLFVKGITEDMTQDSLLEYFDGATEARMPQDNGKNKFFAYIE
FASADQAMKVYKSAKGGIETNDGNLMVDFAKDKRGGGDRGRGGGGFRGGRGRGGGFGGGR
GGGGYGGRGGGRGGGGYGGRGGGRGGGFGGRGRGGYAQVGMVCIDIDCLCAQCIVSIALL
LLLFSIK*
Nucleotide sequence
Length: 1,644
>Haaura.CG.MTP2014.S2.g00071.01.t
ATGGTGCAAATGAAGACAGGAAAATCCAAGGCCAAGAAAGAGGTCAAGAAACCTACAAAA
CCAGTTGTAGCTGCCAAGGAGGAAAGCAGTGAAGAAGAAGAAAGTGATAGTGAAGAAGAG
GAGAAAGTTGTAACAAAGGCTACACCAAAAGCTAACAATAAGAAAGGAAAGGCTGTGGCA
AAGCAGGAAAGTGAGGAGGAAGATAGCGATGAAGATGACGATGATTCTGAAGAAGAGGAA
ACTAAGGCTCCTAGCAAAACCACGAAAAAAGCAGTTTCAAAGAAGGCCGCAAAAGCCGAG
AGCAGCGATGATGATGATGATGACGATGAAGATGACAGTGATGAAGAGGTTGAAAAAAAA
GCAAAGAAGAATGGAACCAAAGAAAAAGTAGAGGATGATGAAGATGACGATGATGATGAC
GACGATGATGATGATGAGGATGAAGAGGAGGATAAGGAAAAGATGGAGATATTTCAGGTT
TCTAAACCTGACAAGAAAAGGAAGCAAAACGATGATAAAACTGAGAATGCAAAGAAAGCG
AAATCAGATGAAACCGTCACAATGGGTTTCAGTAACCTCCCGGAGGGGACGGACGACGAT
TCTTTTAACAAGTTCTTAAAAAGCAAAGGCATACAATGCATAAGTTGCAGAGCTAATTAC
AGCAGAGGAAGAGCGTTCGTAGATATCAGTGCGGATGACAAAGGAAAAGCAATTGGTTTA
AATCAAGTCGAATGGAAAGGCAGTGAATTGGAGGTGGCCGAAGATGCAAAACGTAGTCAG
CAAGCAGGAGGAGGGGTGAACATGTCCGACCGCGATGCAAGGACTATGTTCGTTCGGAAT
CTGCCCTATTCCGCCACGGAAGAAGAAATCTCAGAACTTTTTGAAAATGTTGAAGAAGTT
CGAATATTGATCGACAGACAGACTGGCAATTCAAAAGGGATATGCTTTGTTCAATTTGAC
ACTCCTGAATCATTGAAAACGAATATGGAAAAGAAGGATGGTGTTGAACTACAAGGACGT
TCATTGTATGTGGACTATGCCGGAAATAAGGGTGGCGGTGGTGGTGGAGCTGGTGGTGGT
TTTGGCGGCGGCGGTGACAGGAGGAGATCAAGTGGTGGTGGCCAAGAAGGCAAAACCTTG
TTCGTGAAAGGAATCACAGAAGATATGACTCAGGACTCCCTATTGGAATATTTTGATGGT
GCAACAGAGGCTAGAATGCCCCAGGATAACGGAAAAAACAAGTTTTTTGCATACATCGAA
TTTGCCTCTGCGGATCAAGCTATGAAAGTTTACAAGTCAGCCAAAGGTGGTATCGAAACA
AATGACGGAAATCTTATGGTCGATTTTGCCAAGGATAAGAGGGGAGGTGGAGATCGTGGA
CGAGGTGGCGGCGGATTCAGAGGTGGACGTGGGAGAGGAGGTGGTTTCGGTGGCGGACGT
GGTGGAGGAGGTTACGGCGGTAGAGGAGGCGGACGTGGTGGAGGTGGTTACGGAGGTAGA
GGTGGCGGACGCGGCGGTGGTTTTGGTGGTAGAGGCCGGGGTGGCTATGCTCAAGTAGGA
ATGGTATGTATCGATATTGATTGTTTGTGTGCCCAATGTATAGTCAGCATTGCTCTACTC
TTGTTACTATTCTCCATCAAATAA
| SMART |
RRM_dom (IPR000504) - T[187-253] 1.1 - T[275-345] 2.2E-20 - T[379-448] 7.7E-9 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[266-370] 3.6E-24 - T[371-459] 4.0E-13 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[268-375] 6.45E-28 - T[376-484] 2.82E-18 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[274-349] 17.865 - T[378-452] 12.441 |
| Pfam |
RRM_dom (IPR000504) - T[277-342] 5.8E-16 - T[380-436] 2.4E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NUCL_HUMAN | 34.197 % | 87.4 | 5.45E-18 |
