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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S294.g04078.01.t

Possible name(s)

SYT2; SYT6; SYT9

Location

S294 [25,184 / 36,215]

Sequences

Amino acid sequence

Length: 782

>Haaura.CG.MTP2014.S294.g04078.01.p
MGKRRRRTSSITSSAGESFDYYPQEYYQQATSIENNNHCAKSNTAKSSSPTITTTAAIPR
PNFRRSIVVGQAVGRDQSLTVGQYFPQRRATSPAQSLPDYNGQFTSPTDEKNYVRHHSYD
SAVLGRRVSDYVVYNTIRESEIAQEQKPDHSGADASQGAVNPRKLRHQARVKGKENEPSF
SRPTNAARVSLIVSTVESLDFESSSDSDMEAGNGENRRSIYSPSSPQSRQRVNSKGELFP
TQQRKTSIPSLGGDLKRSPSSGKSSPSILTTVNECGNMSFSPQSPRIRSRSSPVESQPLD
MNALEAALNNHRKSIGDVFGNPFAATDDVMDGPLRSEKDSRTMLDGRRTGADGRLSPTAS
KNSSSGALAVETDHYFPPNARQGRRKSSMQMPIDLSQINPKLYKDLIRLPSMDSEDPDDD
TPMIHFQLDYRRDMDILDVKLVQARKLKTQDFSGTCDPYCSVALLPGFAPRQTRVHKKNT
DPEFEEKFNFSVKEDDLKDRTLEIRAYDFDQFSRDECNGVMQMKMDAIDFGLNNHYDLWK
KFRTEDLEMSESVEVCGDLLLALSYLPSAEKLTVAIQKARNLKFLEGKKGAPDPYIKVCI
YRGSQRLKKKKTDTKHNTNNPVFNQALTFSVSPELLQCPIVRITCHAVHDQKLAYNENLG
YIEIGPNSKGEEELGHWKDVTGKHSNKPVARWHRLRPATGLNNADDDPHSPDTEEGMRRS
SSSIFIPPARIGKAHQFKIIYLISECSENARSLENLFRCPINHLHFSGIVILLSTNFRYR
AV

Nucleotide sequence

Length: 2,346

>Haaura.CG.MTP2014.S294.g04078.01.t
ATGGGAAAAAGACGTCGAAGAACAAGTTCAATTACGTCATCAGCTGGAGAAAGTTTTGAT
TATTATCCACAAGAATACTACCAGCAAGCAACTTCAATTGAAAATAACAACCACTGTGCG
AAAAGCAACACCGCCAAATCTTCATCGCCAACAATTACCACAACAGCAGCGATTCCCCGG
CCGAATTTTCGTCGTTCGATCGTGGTGGGACAAGCGGTGGGACGAGATCAGAGCCTAACC
GTTGGTCAGTATTTTCCGCAGCGAAGAGCGACCTCACCGGCGCAAAGTCTACCAGATTAC
AACGGACAATTTACGTCTCCTACTGACGAGAAAAACTACGTCCGCCATCACAGCTACGAT
TCGGCCGTGTTGGGGAGAAGAGTGAGCGATTACGTAGTATATAACACGATCCGCGAGTCG
GAAATAGCTCAGGAGCAGAAACCTGATCACTCAGGAGCAGACGCATCTCAAGGCGCCGTA
AATCCGAGAAAATTACGGCACCAGGCGAGAGTGAAAGGCAAGGAAAACGAGCCATCATTC
TCGCGTCCTACGAACGCAGCGCGGGTTTCCCTGATAGTTTCTACGGTCGAAAGTCTCGAC
TTTGAATCTTCGTCCGATTCGGATATGGAAGCGGGAAACGGCGAAAATCGGAGGTCGATC
TATTCCCCATCATCCCCTCAGTCCAGACAACGAGTGAACAGTAAAGGAGAACTATTTCCG
ACCCAACAACGAAAGACTTCGATACCAAGCCTCGGCGGAGACCTGAAGCGTTCGCCAAGT
AGCGGAAAATCGTCACCGTCCATACTAACTACCGTGAACGAATGTGGAAACATGTCATTT
TCACCACAATCACCAAGAATTAGATCGCGATCTTCGCCAGTCGAATCCCAACCGCTTGAC
ATGAATGCGCTCGAAGCAGCTTTAAACAACCACCGAAAATCGATCGGAGACGTTTTTGGG
AATCCGTTTGCCGCAACAGACGATGTTATGGACGGTCCTTTGCGCTCAGAAAAGGATTCC
AGAACGATGCTAGACGGACGAAGAACGGGCGCAGATGGCAGGCTGTCTCCCACCGCAAGC
AAAAACAGTTCCAGTGGCGCTCTAGCTGTGGAAACGGACCATTATTTTCCACCCAATGCA
AGGCAGGGACGAAGAAAAAGCTCAATGCAAATGCCAATCGATTTAAGTCAAATCAACCCA
AAATTGTACAAGGATTTGATACGGCTACCAAGTATGGATTCTGAGGACCCTGACGATGAC
ACACCGATGATCCATTTCCAGTTGGACTATCGCCGAGATATGGATATCTTAGACGTTAAA
CTCGTACAGGCACGCAAGCTAAAGACACAGGACTTCAGTGGGACCTGTGACCCATACTGT
TCTGTCGCCCTGCTGCCAGGGTTCGCGCCCCGCCAAACTAGAGTACACAAGAAAAACACA
GATCCGGAATTCGAAGAAAAATTCAACTTCAGTGTAAAGGAAGACGACTTGAAGGACAGA
ACACTCGAAATTCGGGCCTACGATTTCGACCAGTTCTCCCGCGACGAATGTAACGGTGTC
ATGCAGATGAAGATGGATGCCATAGACTTTGGCCTGAACAACCATTATGATCTGTGGAAA
AAATTCAGAACAGAGGATTTGGAGATGTCAGAATCGGTCGAGGTATGTGGAGACTTGCTA
CTGGCGCTATCGTATTTGCCAAGTGCGGAAAAGCTGACGGTGGCAATCCAGAAAGCACGG
AATCTGAAATTTCTCGAAGGGAAGAAAGGTGCACCGGATCCATATATAAAGGTTTGCATA
TACAGAGGAAGCCAGAGGCTGAAAAAGAAAAAAACAGACACCAAGCACAACACAAACAAT
CCAGTATTCAACCAAGCCTTAACTTTCAGCGTTTCTCCCGAATTACTGCAGTGCCCTATC
GTGCGCATTACATGCCATGCAGTGCATGACCAAAAATTGGCATACAATGAAAATCTTGGC
TACATAGAAATCGGCCCTAATTCAAAAGGCGAAGAAGAACTGGGCCACTGGAAAGACGTC
ACCGGCAAACACTCAAACAAGCCTGTCGCTCGTTGGCATCGCCTTCGGCCTGCTACAGGG
CTGAATAACGCGGATGATGACCCACACTCCCCAGATACGGAAGAGGGAATGCGCCGTTCT
AGCAGTTCTATTTTTATTCCACCAGCAAGAATTGGAAAAGCACACCAATTCAAAATCATT
TACTTGATATCAGAGTGTTCAGAAAATGCTCGTAGCTTGGAAAATCTATTTCGCTGCCCT
ATAAATCATTTGCATTTTTCTGGAATAGTGATTCTCCTCTCAACCAATTTCAGATACAGA
GCGGTC

InterProScan

Gene3D
C2_domain_sf (IPR035892) - T[407-547] 9.5E-28 - T[548-696] 9.1E-32
Pfam
C2_dom (IPR000008) - T[436-529] 9.2E-18 - T[571-677] 9.7E-14
SMART
C2_dom (IPR000008) - T[436-537] 3.5E-11 - T[571-689] 2.3E-13
ProSiteProfiles
C2_dom (IPR000008) - T[437-522] 14.156 - T[569-663] 12.721

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SYT9_HUMAN 37.942 % 178 1.51E-48
SYT2_HUMAN 37.091 % 165 2.29E-44
SYT6_HUMAN 34.821 % 167 2.74E-44