- Transcript 'KH2012:KH.C9.220.v2....' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.L96.11.v1....' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S291.g04050.01.t
Possible name(s)
NHP2; RPL7A; SNU13
Gene model
Location
S291 [7,021 / 7,529]
Amino acid sequence
Length: 129
>Haaura.CG.MTP2014.S291.g04050.01.p
MSQKEVNPKAFPLADPDLSKQIMDLVQQCANYKQLKKGANEATKTLNRGLSELIILAADA
EPLEIILHLPLLCEDKNVGYVFVPSKQALGRACGVSRPVIAASIITNEGSQLSPQIRTLT
TSVEKLLV*
Nucleotide sequence
Length: 508
>Haaura.CG.MTP2014.S291.g04050.01.t
GAAGTAGAACTTCTCGATTTATGTGAAAAAATTTGCAACAGCCTCAGTGAAGCCGTGATC
CATAAACCACTTATTCAATTGGTGAGCCAAGAGGTATATCGAAACAAACAACATTCTGAA
AATGTCGCAGAAAGAAGTGAACCCCAAGGCTTTCCCGTTAGCAGATCCGGACCTTTCCAA
ACAGATTATGGACTTGGTTCAGCAATGTGCAAATTACAAACAACTGAAAAAAGGAGCTAA
TGAAGCGACTAAAACATTGAACAGAGGGTTATCTGAACTGATAATACTAGCTGCCGACGC
AGAACCATTGGAAATAATCTTGCATTTACCTTTGCTATGCGAAGATAAGAACGTGGGATA
CGTCTTCGTTCCTTCCAAACAAGCACTTGGACGTGCTTGCGGGGTATCTAGGCCTGTCAT
AGCGGCTTCCATAATAACCAATGAAGGGTCACAACTCTCACCTCAAATACGAACTCTGAC
GACTTCTGTGGAGAAATTGTTGGTTTAA
| Gene3D |
L30e-like (IPR029064) - T[1-128] 1.8E-49 |
| SUPERFAMILY |
L30e-like (IPR029064) - T[6-124] 2.36E-34 |
| PRINTS |
H/ACA_rnp_Nhp2_euk (IPR002415) - T[8-21] 3.2E-28 - T[21-36] 3.2E-28 - T[38-48] 3.2E-28 - T[82-94] 3.2E-28 |
| Pfam |
Ribosomal_L7Ae/L30e/S12e/Gad45 (IPR004038) - T[21-111] 4.2E-26 |
| PRINTS |
Ribosomal_L7Ae/L8/Nhp2 (IPR018492) - T[35-49] 6.4E-20 - T[54-67] 6.4E-20 - T[70-80] 6.4E-20 - T[80-94] 6.4E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NHP2_HUMAN | 37.143 % | 87.8 | 3.18E-23 |
| NH2L1_HUMAN | 73.438 % | 189 | 9.76E-64 |