- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S282.g03965.01.t
Possible name(s)
ITGA11; ITGA4; ITGA9
Gene model
Location
S282 [39,046 / 50,828]
Amino acid sequence
Length: 1,460
>Haaura.CG.MTP2014.S282.g03965.01.p
MKKRLLYTLLAFVQFTVAQAFNIEVSVNWPLSISNATTGSNATNATSTYAGYNVIVSAER
GEINMIIGEPHYGMNGSLISCNLTYLKYIEMTTTTAGIETTASSINFTSNATNNTTSGIG
ITSASTEEASTNVSTTPSPTQVTSSGMNTTMMSTGITSPDFSELSCERLNIQDNVQTGNE
GDNHNLTTDFFGSSVVRNNVTSFAVCSPTRQQQCPNSYFVPGACYVGDPTIDKWKFLQWN
ETACFDKKIAILFVVDGSGSIGEGNFGVVRRWLIDASGLLLQTFGDAALIEVMQYSSADH
PFSGITVQDSNVFEIPFKFGECEDITCITTGVNKMSYLGHQTFTHYALRRAREVELKRPI
VEGDVEKIIVVLTDGAATDPALLGQWYNEATADGITVFAVGVSDKINVQELRTIANGGTS
DDRVSTVNTFSDLAAILRNLTIEISSGALEGGSINSTVTQPLSNAQLGFSIDFGIMNDTE
LMVGLRALVMKVLYLFVMLSTPIDCELHSYYRNLGLYIDLSVFFFAENFEINFFIGVVFI
TDAIRRATANRVNEFLLLGAPGAYDWSGAVTKYDSISDTTADIPTYEDVQGVLPNRTKES
YMGYTLTTGFFDGSSAGEFAATGAPRYMLKGAVVVFKPEKDSAKFNQPHRIMANKANSQL
GSYFGGSLLAVDINGDDIDDLFIGAPLYSGVTHDEGRVYVYVSKSGGGTLSSWASSSYEP
FVLDGKKLIGGRFGTAIASAGDLNNDKINDVIIGAPLTEGDRGAIFIYHGKRNGFDTNVK
QMILASELTGVNLKYFGQSIQGGVDLDGNLYPDVAVGAPKSDTVVIFRSRPVVEIIATVT
FLQPKIDIFNCIDNNYVNCTSVEVCFTAQGLSIESVIGLTYNLTLDSGKQSLGEKRLEFR
DALSPTGVTTIRQDLSLKSRTRTCVTRGVNVKANIKDYDTTVNVAVTYDLQASHTNQALS
SIRDPTAPNTATDSLVFDKNCGAGGQCRYDLQLSGSLLLPPATLATEEDLTNGGKILIVS
DQTDINRVIVKLNLTNKGQNAFGTQVKVDYTSELSWSRIENRKGVPATNSCIEALGQPVD
MGNGILRQILQYNYRTSIMQQNSWCYFEISFLTRNLRNNGKLDSLSIDVNAFSSDTTNSS
TEVDPSDNSWKQTRLIKYRSDFTVEEQSTDPDIQFNFTDTERVITSVKQIGPNTSDVVVN
YKIRGTGYSNIPTVTLRLIWPSKTASNYSLLYLHSVACNTMYTTANPDKGDNNMLSCNCE
MDKVNIYNLSTDAPNENNTGGANFTTEPATVFLDQKEYNCFSKKGNHTCETMTCNINNLG
SSTEVNFIALFRLVTSTFNLTNTSNTDTQLISRFEAFETSPIILNKEGKNNSFANPASRV
ARKYTEPIIVIPTNNTWIYILAAVGGLLLLIAIAAILWKVGFFKSKYADMKKDAQDDMDD
AADFPGPNNGGSTADIVDN*
Nucleotide sequence
Length: 4,380
>Haaura.CG.MTP2014.S282.g03965.01.t
ATGAAGAAGCGTTTGTTGTACACTCTACTTGCATTCGTGCAATTTACCGTCGCGCAAGCG
TTCAATATAGAAGTGTCTGTTAACTGGCCGCTCTCTATTTCCAATGCCACTACAGGTTCG
AATGCCACCAATGCAACATCGACTTATGCCGGATACAATGTTATTGTTTCAGCGGAAAGG
GGTGAAATTAATATGATCATTGGCGAACCGCATTATGGTATGAATGGATCACTGATAAGC
TGCAACCTAACTTATTTGAAATACATCGAGATGACAACAACCACAGCCGGAATTGAGACA
ACGGCTTCCTCTATAAATTTCACAAGCAATGCAACCAACAACACCACTAGCGGCATCGGT
ATCACCTCTGCCTCCACTGAGGAAGCAAGCACTAACGTATCCACAACACCTTCACCCACC
CAAGTGACATCTAGCGGAATGAATACAACTATGATGTCAACGGGCATTACGTCTCCAGAT
TTTTCGGAGCTGTCTTGTGAACGTTTGAATATTCAAGATAATGTACAAACGGGAAATGAA
GGAGACAATCATAACCTCACTACTGATTTCTTCGGATCGTCTGTTGTCAGGAACAATGTC
ACTTCTTTTGCGGTTTGCAGTCCTACGCGTCAGCAGCAATGTCCAAACAGCTATTTCGTT
CCGGGTGCTTGCTATGTCGGTGATCCAACTATAGATAAATGGAAGTTCTTGCAATGGAAT
GAAACGGCGTGTTTTGACAAGAAAATCGCCATATTATTTGTCGTTGATGGTTCGGGGTCG
ATAGGGGAAGGAAATTTCGGAGTGGTTCGAAGATGGTTGATTGACGCGTCTGGATTACTT
CTTCAAACATTCGGTGATGCGGCTTTGATCGAAGTAATGCAGTATTCCTCAGCTGACCAT
CCGTTTTCCGGAATTACTGTTCAAGATTCAAATGTGTTCGAAATCCCATTCAAATTTGGA
GAATGTGAAGATATCACATGCATAACTACAGGAGTAAATAAAATGTCTTATCTTGGACAC
CAGACCTTCACACATTACGCACTGAGACGAGCACGCGAGGTAGAATTAAAACGCCCAATT
GTTGAAGGTGATGTTGAAAAAATTATAGTAGTACTAACAGATGGAGCTGCAACAGATCCA
GCGCTGTTGGGCCAATGGTACAATGAAGCTACGGCAGATGGCATAACAGTGTTTGCAGTC
GGCGTCAGCGATAAAATTAATGTACAAGAATTGAGAACCATCGCCAACGGTGGAACAAGT
GATGACCGTGTATCGACAGTTAATACATTTTCCGACCTGGCGGCAATCTTAAGAAACCTT
ACGATTGAGATCAGTTCCGGAGCTTTAGAAGGAGGTAGTATCAATTCAACAGTAACTCAA
CCTCTCAGTAACGCGCAACTCGGTTTTTCGATTGATTTTGGAATAATGAACGACACTGAG
CTTATGGTAGGATTGCGTGCATTGGTTATGAAAGTCTTATATCTGTTCGTAATGCTGTCA
ACACCCATAGATTGCGAGTTGCACAGCTACTATCGTAACCTAGGTTTGTACATAGATCTT
AGTGTTTTCTTTTTTGCTGAAAATTTCGAAATAAACTTTTTCATTGGAGTTGTATTTATT
ACGGACGCGATACGGCGCGCGACGGCAAATCGGGTTAATGAATTTCTCTTGCTTGGTGCA
CCAGGAGCATATGATTGGAGCGGAGCCGTTACGAAGTATGACTCGATCTCGGATACTACT
GCAGATATTCCTACGTACGAAGATGTTCAGGGTGTATTGCCGAACAGAACAAAAGAATCA
TATATGGGATATACGCTGACCACCGGATTTTTCGATGGTTCTTCCGCAGGCGAATTTGCA
GCCACGGGCGCGCCCCGTTACATGCTGAAAGGAGCGGTTGTCGTGTTCAAACCTGAAAAA
GACAGCGCTAAATTCAATCAACCTCACAGAATAATGGCTAATAAGGCAAACAGTCAGCTA
GGTTCCTATTTCGGCGGAAGTTTGCTAGCGGTTGACATCAATGGCGATGATATAGATGAC
CTGTTCATTGGCGCCCCATTGTACAGCGGAGTCACTCACGACGAGGGCCGTGTTTACGTT
TATGTCAGCAAAAGTGGAGGCGGAACTTTGAGCTCATGGGCTAGTAGCAGCTACGAACCA
TTCGTCCTAGACGGTAAGAAACTAATAGGTGGTAGATTTGGAACAGCTATAGCTTCTGCG
GGAGATCTCAACAACGACAAGATAAACGACGTCATAATAGGAGCTCCGTTGACAGAGGGC
GACAGGGGAGCTATATTCATTTACCATGGGAAAAGGAACGGTTTTGATACGAATGTGAAG
CAGATGATCTTGGCTTCGGAACTGACCGGCGTCAACTTGAAATACTTCGGGCAATCTATC
CAGGGAGGCGTCGATCTGGACGGCAATCTTTATCCCGATGTAGCGGTAGGGGCACCGAAG
AGCGACACTGTTGTCATATTTAGGTCTCGACCGGTAGTTGAGATAATTGCCACCGTAACT
TTTCTACAACCTAAGATTGACATCTTTAATTGCATTGATAATAACTACGTCAACTGTACT
TCGGTGGAAGTCTGTTTTACTGCACAAGGACTATCAATTGAGTCAGTTATAGGTCTGACA
TACAATCTGACACTTGATTCCGGGAAGCAATCGCTTGGCGAAAAAAGGCTCGAGTTCAGA
GACGCCCTGTCGCCCACTGGCGTCACTACTATTAGACAAGATCTATCCCTAAAGAGTAGA
ACTCGAACTTGCGTCACTAGAGGAGTTAATGTGAAGGCAAACATCAAAGACTATGACACC
ACCGTGAATGTCGCTGTTACGTATGATTTACAAGCTAGTCATACCAACCAAGCTTTGTCA
TCTATCCGCGATCCAACCGCTCCAAACACCGCTACAGATAGCTTGGTGTTTGATAAGAAT
TGCGGTGCAGGAGGGCAATGCCGATACGATTTACAATTATCAGGGTCCCTCTTACTACCA
CCTGCAACTCTCGCAACCGAAGAAGATTTGACCAATGGCGGAAAGATTCTGATAGTTAGC
GATCAAACCGACATTAACCGGGTTATTGTGAAACTTAACCTCACCAACAAGGGACAAAAT
GCTTTCGGAACGCAAGTAAAAGTTGACTACACATCTGAGCTGAGCTGGAGCAGGATTGAG
AATCGGAAAGGTGTTCCAGCCACTAACTCATGTATTGAGGCTCTCGGTCAGCCAGTCGAT
ATGGGAAATGGAATTCTGCGGCAAATACTACAATACAATTATCGTACAAGTATCATGCAA
CAGAACTCGTGGTGTTACTTTGAAATCTCCTTCTTAACAAGGAACCTTCGTAACAACGGT
AAACTGGACTCACTGAGCATTGATGTCAATGCGTTTTCAAGCGATACTACTAATTCATCA
ACCGAAGTTGACCCATCTGACAATTCATGGAAACAAACGAGACTGATTAAATATCGCTCC
GACTTCACAGTGGAAGAGCAATCTACTGACCCGGATATTCAGTTCAATTTCACTGATACA
GAAAGAGTTATAACGTCTGTGAAGCAAATAGGTCCGAATACATCAGATGTTGTGGTTAAT
TACAAGATCAGAGGCACCGGTTACAGCAACATTCCTACTGTGACACTCAGATTGATTTGG
CCATCAAAAACCGCTTCCAATTATTCTCTGCTCTATCTCCACTCTGTTGCCTGCAATACT
ATGTATACGACTGCGAATCCAGACAAAGGCGATAATAACATGCTCTCTTGCAATTGCGAA
ATGGATAAAGTGAATATCTATAACCTAAGCACAGATGCACCGAACGAAAACAATACCGGA
GGAGCGAATTTTACAACTGAGCCGGCGACTGTGTTCCTTGATCAGAAAGAATATAACTGC
TTCAGTAAAAAAGGTAATCACACCTGCGAGACCATGACATGCAATATAAATAACCTGGGA
TCTTCAACAGAAGTGAATTTCATCGCTTTGTTCAGACTCGTAACATCAACGTTCAATTTG
ACAAACACTTCCAATACGGACACACAATTGATATCTCGTTTCGAAGCCTTTGAAACATCT
CCGATCATTTTGAACAAGGAAGGCAAGAATAACAGTTTCGCAAACCCTGCTTCCAGAGTT
GCCAGGAAATACACAGAACCTATTATTGTAATACCTACAAACAACACATGGATATACATT
CTTGCTGCTGTTGGTGGTCTTCTGTTGCTCATCGCTATTGCAGCAATATTATGGAAGGTT
GGGTTCTTCAAGAGTAAATACGCAGACATGAAAAAAGATGCGCAGGATGATATGGACGAC
GCTGCTGATTTCCCAGGTCCAAACAATGGCGGTTCAACAGCTGACATCGTGGACAATTAA
| ProSiteProfiles |
Int_alpha_beta-p (IPR013519) - T[176-236] 6.399 - T[520-582] 6.289 - T[588-645] 7.098 - T[649-710] 12.677 - T[719-777] 10.325 - T[781-844] 12.14 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[206-440] 1.27E-29 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[237-448] 2.6E-29 |
| SMART |
VWF_A (IPR002035) - T[248-441] 1.0E-19 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[250-440] 19.481 |
| Pfam |
VWF_A (IPR002035) - T[251-436] 4.1E-19 |
| Gene3D |
Integrin_alpha_N (IPR028994) - T[544-833] 4.8E-80 |
| SMART |
Int_alpha_beta-p (IPR013519) - T[598-650] 9.4 - T[660-718] 2.3E-7 - T[729-784] 8.0E-13 - T[792-840] 0.014 |
| PRINTS |
Integrin_alpha (IPR000413) - T[599-611] 2.0E-51 - T[657-677] 2.0E-51 - T[732-756] 2.0E-51 - T[796-817] 2.0E-51 - T[823-842] 2.0E-51 - T[937-950] 2.0E-51 - T[1406-1425] 2.0E-51 |
| Pfam |
FG-GAP (IPR013517) - T[664-701] 1.8E-8 - T[736-768] 7.2E-5 |
| Pfam |
Integrin_alpha-2 (IPR013649) - T[829-1299] 1.1E-36 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[831-982] 1.05E-15 - T[986-1142] 1.15E-5 - T[1179-1360] 1.88E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITA9_HUMAN | 26.03 % | 235 | 2.68E-63 |
| ITA4_HUMAN | 29.672 % | 210 | 2.74E-55 |
| ITA11_HUMAN | 28.084 % | 222 | 6.66E-59 |
