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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S2823.g09911.01.t

Possible name(s)

CR1; CSMD1; SVEP1

Gene model

Haaura.CG.MTP2014.S2823.g09911

Location

S2823 [7,807 / 8,745]

Sequences

Amino acid sequence

Length: 170

>Haaura.CG.MTP2014.S2823.g09911.01.p
SRCGPNGTFTPDPTTLNCTETECQDYMMPHADRTWLTGYQRYSVAQYKCHDEYWFDKGIY
TFTYRCNQDGRWEPSISEKNCHKITCGDVYIQNIVFPKGTTVDFGSKIDVHCIDGYALNK
VNKAFMHTLTCQEGGVYKPPVSSLRCEPIPCEQPPSIPNSYVYGLFEFGM

Nucleotide sequence

Length: 510

>Haaura.CG.MTP2014.S2823.g09911.01.t
TCTCGCTGTGGTCCGAACGGTACATTCACACCAGATCCTACTACATTAAATTGCACAGAG
ACCGAGTGTCAGGATTACATGATGCCTCATGCGGACCGGACTTGGTTGACTGGTTATCAG
AGATATAGTGTCGCTCAGTACAAATGTCATGATGAGTATTGGTTCGATAAAGGAATTTAC
ACGTTTACATACCGTTGCAATCAGGATGGTAGATGGGAGCCAAGCATTTCTGAGAAGAAT
TGCCATAAAATTACCTGTGGAGATGTGTACATACAGAACATTGTATTTCCAAAAGGTACT
ACTGTGGACTTTGGTTCCAAAATTGATGTGCACTGTATAGACGGTTACGCCTTGAACAAA
GTAAACAAGGCCTTCATGCATACGCTAACTTGCCAAGAAGGAGGCGTTTACAAGCCTCCT
GTTTCAAGTCTACGATGTGAACCTATACCATGTGAACAGCCACCTTCTATACCCAATAGC
TATGTGTATGGACTGTTTGAATTTGGTATG

InterProScan

ProSiteProfiles
Sushi_SCR_CCP_dom (IPR000436) - T[16-83] 7.257 - T[84-148] 6.107
SUPERFAMILY
Sushi/SCR/CCP_sf (IPR035976) - T[23-87] 1.53E-5 - T[84-159] 3.06E-6
Pfam
Sushi_SCR_CCP_dom (IPR000436) - T[29-77] 0.0036 - T[100-141] 5.5E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value