- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S27.g00781.01.t
Possible name(s)
SDHB
Gene model
Location
S27 [122,125 / 123,117]
Amino acid sequence
Length: 287
>Haaura.CG.MTP2014.S27.g00781.01.p
MAVSLRISRTVLRKSFPSFHPTAMVAIRTSATTAEAKIDEASRLKKFSIYRWNPEVKGQL
PVMQNYEVDLNECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGGNTLACLA
KIDDNLKKTTKIYPLPHMFVVKDLVPDMNNFYAQYRSIEPYLKQKDESKKGVENYQSVED
RQKLDGLYECIMCACCSTSCPSYWWLSNKYLGPAVLMQAYRWIIDSRDEYTYERLKKLDD
PFSVYKCHTIMNCTQTCPKGLNPGLAIAEIKKMISQLKPGEAVVRS*
Nucleotide sequence
Length: 861
>Haaura.CG.MTP2014.S27.g00781.01.t
ATGGCCGTCAGTTTAAGGATTTCTCGCACAGTGTTGCGAAAATCTTTCCCTTCGTTTCAC
CCAACAGCAATGGTTGCCATTAGGACGTCTGCAACTACAGCAGAGGCAAAGATAGACGAA
GCATCTCGTCTAAAGAAGTTCTCCATCTATAGATGGAACCCAGAAGTTAAAGGTCAACTC
CCTGTTATGCAAAACTATGAGGTCGATCTCAATGAATGTGGACCCATGGTGTTGGATGCT
CTGATCAAGATTAAAAACGAAATTGATCCTACGCTCACCTTCCGGAGATCGTGCAGAGAA
GGAATTTGTGGTTCATGTGCGATGAATATCAACGGAGGAAATACACTCGCGTGCTTAGCG
AAAATTGATGATAACCTGAAAAAAACTACAAAGATATATCCACTCCCTCACATGTTCGTG
GTGAAGGACCTGGTGCCGGATATGAACAACTTCTACGCTCAGTATCGTTCGATCGAGCCT
TACCTAAAACAGAAAGATGAGAGCAAAAAAGGGGTCGAAAATTATCAGTCTGTCGAGGAT
CGTCAAAAGTTAGACGGGTTGTATGAGTGTATCATGTGTGCTTGTTGTTCTACTTCTTGT
CCTAGCTATTGGTGGCTCTCTAACAAGTATCTTGGTCCTGCCGTTTTGATGCAAGCATAT
CGATGGATCATTGACAGCCGAGACGAATATACTTACGAGAGACTCAAGAAGCTAGATGAC
CCGTTTTCCGTCTACAAATGCCACACTATCATGAACTGCACGCAGACCTGTCCTAAGGGA
CTCAACCCTGGCTTAGCCATAGCCGAAATTAAAAAGATGATATCTCAGCTAAAGCCAGGA
GAAGCCGTCGTCAGATCATAA
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[33-147] 1.0E-48 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[43-147] 6.29E-30 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[46-152] 2.3E-33 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[49-271] 2.9E-85 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[54-138] 10.125 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[64-127] 6.91819E-5 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[98-106] . |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[148-275] 4.53E-36 |
| Gene3D |
Helical_ferredxn (IPR009051) - T[148-284] 1.4E-60 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[180-210] 7.172 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[190-201] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 70.438 % | 414 | 1.91E-147 |
