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  1. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S274.g03910.01.t

Possible name(s)

SAMD8; SGMS1; SGMS2

Gene model

Haaura.CG.MTP2014.S274.g03910

Location

S274 [62,456 / 67,106]

Sequences

Amino acid sequence

Length: 419

>Haaura.CG.MTP2014.S274.g03910.01.p
MTAVANYEDENVFRWTTTDVENWLKKCGLDRFVRLFCEDHEINGEALLMLTEKDLQNPPL
QLTKLGDIKKLSSCLKNLQHKQRKISNDGSYNTKEFNHHILDPMPSPITSQTLDNSFMQT
SGSDHTTLFLPPSDKEFPYPNEGENILYGRGKRGVVFRPEYKKTILSMVYGTVIMFMHTF
AVVVVHDRVPDKTKHPPLPDIFLDNIPLIPQAFILAEVCLVILLAIWACILIFHKHRCII
IRRMYCIISLVYFLRCITMFVTSLSVPSAHLQCSAAQYSTLYARIKRAYELFTGFGLSLN
GLHTCGDYIFSGHATILTMLTLLITKYSPVRSYVLQISSWIICLFGLFLILAGHEHYTID
VIIAFCVTSRLFQHYHISANMRSGQHGKTITILFPFFSYFECNVPGEVPNEFEWPFPML

Nucleotide sequence

Length: 1,257

>Haaura.CG.MTP2014.S274.g03910.01.t
ATGACCGCCGTGGCTAATTATGAGGACGAAAACGTCTTTCGATGGACAACAACAGATGTC
GAAAACTGGCTGAAAAAATGTGGATTGGATAGATTTGTCAGATTATTTTGTGAAGATCAT
GAAATAAATGGTGAAGCGTTGCTCATGTTGACAGAAAAAGATCTGCAAAACCCACCGCTG
CAGCTGACAAAACTGGGCGATATCAAGAAACTTTCCTCATGTTTAAAAAATTTACAACAC
AAGCAGAGGAAAATATCTAATGATGGTAGCTACAATACGAAAGAATTCAACCACCATATC
CTCGATCCCATGCCGTCTCCAATCACTAGTCAAACCCTTGATAACAGTTTCATGCAGACG
AGCGGAAGTGATCACACGACTCTTTTTTTACCCCCGTCGGACAAAGAGTTCCCATACCCG
AACGAGGGCGAGAACATATTATATGGCCGTGGAAAGAGGGGAGTTGTGTTCAGGCCTGAA
TATAAGAAAACAATTCTGAGCATGGTCTACGGTACAGTGATCATGTTCATGCATACATTT
GCAGTGGTTGTTGTTCATGACCGTGTGCCAGACAAAACAAAACACCCTCCCCTTCCTGAT
ATATTTCTGGACAACATTCCATTGATACCACAGGCGTTTATCCTGGCTGAAGTGTGTCTT
GTAATATTACTGGCAATATGGGCATGCATTCTAATATTTCATAAACACAGGTGTATCATT
ATTCGTCGCATGTACTGCATCATTTCATTAGTATACTTCCTGCGTTGCATTACAATGTTT
GTCACATCATTATCAGTTCCAAGTGCACACTTGCAATGCAGTGCAGCTCAATATTCCACA
CTGTACGCACGTATCAAGAGGGCGTATGAGTTGTTCACTGGATTTGGACTGTCTTTGAAT
GGTTTACACACTTGTGGAGATTACATTTTCAGTGGCCATGCAACCATTCTTACGATGCTC
ACTCTTCTTATTACCAAATATTCGCCCGTTCGTTCATACGTGCTCCAAATTTCTTCGTGG
ATTATTTGTTTGTTTGGATTATTCCTCATCCTAGCAGGACATGAGCATTATACAATAGAC
GTAATCATTGCATTCTGTGTTACCTCGAGACTATTTCAACATTATCACATTTCGGCAAAT
ATGAGGAGTGGTCAACATGGCAAAACAATAACGATCTTGTTTCCGTTCTTCTCCTATTTC
GAATGCAATGTACCTGGTGAGGTGCCAAACGAGTTTGAATGGCCGTTCCCAATGCTC

InterProScan

SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[10-84] 1.06E-15
SMART
SAM (IPR001660) - T[12-81] 3.8E-6
Pfam
SAM (IPR001660) - T[15-78] 1.0E-12
ProSiteProfiles
SAM (IPR001660) - T[15-81] 14.422
Pfam
Sphingomyelin_synth-like_dom (IPR025749) - T[304-377] 1.2E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMS1_HUMAN 32.53 % 232 3.13E-72
SMS2_HUMAN 40.076 % 204 7.28E-62
SAMD8_HUMAN 44.691 % 359 1.25E-121