- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Transcript 'Moocci.CG.ELv1_2.S49...' >
- Transcript 'Moocci.CG.ELv1_2.S26...' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S256.g03742.01.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
S256 [59,898 / 61,851]
Amino acid sequence
Length: 651
>Haaura.CG.MTP2014.S256.g03742.01.p
MRAVEFKVVETDPAPYCIVSPDTVIHCEGEPIKREDEEEALNEIGYDDIGGCRKQLAQIK
EMVELPLRHPALFKAIGIKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK
LAGESESNLRKAFEEAEKNAPAIIFIDELDSVAPKRDKTHGEVERRIVSQLLTLMDGLKQ
RAHVIVIGATNRPNSIDAALRRFGRFDREVDISIPDATGRLEILRIHTKNMKLADDVDLE
QVANESHGHVGADLAALCSEAALQQIRGKMDLIDLEEETIDAEVMDNLAVTMEDFRWAMS
QSNPSALRETVVEIPNVSWTDIGGLEGVKTELQELVQYPVEHPDKFLKFGMTPSKGVLFY
GPPGCGKTLLAKAIANECQANFISIKGPEMLTMWFGESEANVREVFDKARQAAPCVLFFD
ELDSIAKSRGGSVGDAGGAADRVINQILTEMDGMSNKKNVFIIGATNRPDIIDSAILRPG
RLDQLIYIPLPDDKSRIQILKANLRKSPVARDVDLIYIAKVTKGFSGADLTEICQRACKL
AIRESIEAEIRAERERRDNPDVHMEDDEDPVPEIRKQHFEEAMKFARRSVSDKDIRKYEM
FAQTLQQSRGFGGFRFPGSENPDAGGGENRGTAGAGDLYQDGDEGDDLYD*
Nucleotide sequence
Length: 1,953
>Haaura.CG.MTP2014.S256.g03742.01.t
ATGAGAGCAGTTGAGTTCAAAGTAGTCGAAACAGACCCCGCACCCTACTGCATCGTTTCA
CCCGACACTGTCATCCATTGTGAGGGAGAACCGATCAAGCGTGAAGACGAAGAAGAAGCC
CTCAACGAAATCGGATACGACGACATCGGAGGATGTCGTAAGCAACTGGCTCAAATCAAG
GAGATGGTCGAATTGCCATTACGTCATCCTGCTCTTTTCAAAGCTATCGGAATCAAGCCC
CCACGCGGTATCTTGCTCTATGGCCCGCCCGGCACAGGAAAAACACTCATCGCTCGTGCC
GTTGCTAACGAGACCGGTGCTTTTTTCTTCCTCATTAACGGACCGGAGATCATGAGTAAA
TTGGCTGGAGAATCGGAGTCGAATTTGAGAAAGGCGTTCGAAGAAGCTGAGAAGAATGCT
CCAGCGATTATTTTCATAGATGAACTAGACTCTGTCGCCCCAAAGAGAGACAAGACTCAT
GGAGAAGTGGAGAGACGTATTGTCTCCCAATTGCTCACTCTAATGGACGGGTTGAAGCAG
CGTGCTCACGTCATCGTAATAGGAGCTACGAACCGCCCGAATTCGATAGATGCCGCTCTG
AGACGATTCGGTCGCTTTGATAGAGAAGTCGATATTAGCATTCCGGATGCGACAGGGCGT
CTTGAGATTCTTCGTATCCACACCAAAAACATGAAATTAGCTGATGATGTTGATCTTGAG
CAAGTAGCTAACGAATCTCATGGACATGTTGGAGCAGATCTTGCTGCTCTTTGTTCAGAG
GCTGCTTTACAGCAAATTCGAGGAAAGATGGATCTTATTGACCTGGAAGAGGAGACCATC
GACGCAGAAGTCATGGACAATCTTGCCGTTACGATGGAAGACTTCCGCTGGGCTATGTCT
CAAAGCAATCCTTCTGCTCTTCGTGAAACTGTCGTTGAAATTCCCAATGTTTCTTGGACT
GACATAGGTGGTCTCGAAGGTGTCAAAACCGAGCTGCAAGAGCTTGTGCAATACCCTGTG
GAGCATCCTGACAAGTTCTTGAAATTCGGTATGACCCCGTCAAAAGGAGTTCTCTTCTAT
GGTCCTCCAGGTTGTGGTAAAACCCTTCTGGCTAAAGCCATCGCAAACGAGTGCCAAGCA
AATTTCATCTCGATAAAAGGACCTGAAATGCTCACAATGTGGTTTGGAGAATCTGAAGCC
AATGTCCGTGAGGTTTTTGACAAAGCTAGACAGGCTGCTCCTTGTGTTCTCTTCTTTGAT
GAGCTGGATTCAATCGCTAAGTCGAGAGGCGGTAGCGTCGGTGATGCAGGCGGAGCAGCA
GACAGAGTGATTAATCAGATCTTGACGGAAATGGACGGTATGAGCAACAAGAAAAATGTT
TTCATCATCGGAGCCACCAACCGACCCGACATCATCGATTCTGCCATCCTCCGTCCCGGC
AGACTCGACCAGCTGATTTATATTCCTTTGCCAGACGATAAATCTCGCATCCAGATCCTT
AAAGCTAATTTACGTAAATCACCTGTAGCCAGAGATGTTGACTTGATCTATATCGCCAAA
GTGACGAAAGGATTCAGTGGTGCTGACTTAACGGAAATTTGTCAGCGTGCATGCAAGCTG
GCCATCCGTGAAAGTATCGAAGCAGAAATAAGAGCTGAAAGAGAAAGGAGAGATAATCCT
GATGTCCACATGGAAGACGACGAGGATCCGGTCCCAGAAATTCGAAAACAGCATTTCGAG
GAAGCGATGAAATTTGCTCGCAGGTCCGTATCTGACAAGGACATCAGGAAGTATGAAATG
TTTGCCCAGACTCTACAGCAGAGCAGAGGTTTCGGCGGATTCCGATTTCCTGGATCTGAA
AATCCTGATGCCGGTGGAGGAGAGAACCGGGGTACTGCGGGAGCCGGAGATCTTTACCAG
GATGGGGACGAGGGTGATGATCTTTATGACTAA
| SUPERFAMILY |
CDC48_domain_2-like_sf (IPR029067) - T[1-40] 5.56E-13 |
| TIGRFAM |
AAA_ATPase_CDC48 (IPR005938) - T[3-606] 1.1E-244 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[44-305] 3.03E-65 - T[315-604] 4.33E-75 |
| SMART |
AAA+_ATPase (IPR003593) - T[80-216] 4.2E-24 - T[353-492] 1.8E-24 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[84-212] 4.4E-47 - T[357-490] 1.1E-46 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[184-202] . - T[460-478] . |
| Pfam |
Vps4_C (IPR015415) - T[566-603] 6.0E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 47.478 % | 551 | 0 |
| TERA_HUMAN | 87.211 % | 1114 | 0 |
| NVL_HUMAN | 42.045 % | 471 | 3.62E-156 |