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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S248.g03650.01.t

Possible name(s)

LINS1

Location

S248 [21,186 / 23,080]

Sequences

Amino acid sequence

Length: 530

>Haaura.CG.MTP2014.S248.g03650.01.p
MELGKTNYENLHKYLSDILTDFEKGENFEILHDEILKYTENLQSVVNKILVLCKCSSICF
LESTMFMSLLDILKLLCELIIDITNSSVLKHFFANLFRDVSAQFIISLIDCQISEYCVQY
KIAQVLSYFISACGIVFCIPDYYQKLHIHLQESKTCSPLLCLGTIEKLCELNENYSNLSF
INFLFTNVEFYFKNFFPRCLIEGSRQEQIFALRIYHRCLETSNDNRIILIQHLKYVADNQ
NIILCDPVLCEKYLQFLKALFPFPGEIDYRTAAIGPIAERMVSKLLDSMHIIPKCKKYFG
GVDIESSYGHNTIVCAIANFFFKFACSIFDLPFTTARNVLICDIWYCVVDLITGARDSQS
EGRLSERLIGLFLEQDDDLINMMLLHLHFSCSYLKWIPNHDEINANPDDITPHQLFLTLM
KHLSFDSSIMLDWLTSDETKFLQYFVKYLKFLASSSNDFLKDCLEMDELNKNNASSAEEF
KSYSIQSENCLNDLTQSIKRLEGAGLFPYSAKPLLRLLEACIQLFLALK*

Nucleotide sequence

Length: 1,590

>Haaura.CG.MTP2014.S248.g03650.01.t
ATGGAACTTGGGAAAACTAACTATGAGAATTTACATAAATACTTGAGTGACATTCTTACT
GACTTTGAAAAAGGGGAAAATTTTGAAATTCTTCATGATGAGATTTTGAAATACACAGAA
AATTTACAATCAGTCGTAAACAAGATACTTGTCTTGTGTAAATGCTCATCTATTTGCTTT
TTAGAGTCAACGATGTTTATGTCATTGCTTGATATTTTGAAATTGCTATGTGAACTTATT
ATTGATATCACAAATAGCTCTGTTTTGAAACATTTTTTCGCTAACCTATTTCGCGATGTG
TCTGCTCAGTTCATTATTTCTCTGATTGATTGTCAGATTTCTGAATATTGTGTTCAGTAC
AAGATAGCCCAGGTTCTTTCCTATTTTATTTCTGCATGTGGCATTGTTTTTTGCATTCCT
GACTATTATCAAAAACTTCACATTCATTTACAAGAAAGCAAGACGTGCTCACCACTTCTT
TGCCTTGGTACGATTGAGAAGTTATGTGAATTGAATGAAAACTATTCCAACTTGTCTTTT
ATTAATTTCCTATTCACAAACGTTGAGTTTTATTTTAAGAACTTTTTCCCAAGGTGTCTA
ATTGAAGGTTCAAGACAAGAACAGATTTTTGCCCTGAGAATATATCACAGATGTTTAGAA
ACTTCTAATGACAATAGAATTATATTGATTCAACATTTGAAATATGTTGCTGACAACCAA
AATATAATTTTATGTGATCCTGTGTTATGTGAAAAATATTTACAATTCTTGAAGGCATTG
TTTCCTTTTCCCGGTGAAATTGATTACAGAACTGCTGCGATAGGGCCTATAGCAGAAAGA
ATGGTTAGCAAGTTGCTAGATTCCATGCACATAATACCTAAATGTAAGAAATATTTTGGT
GGGGTGGATATTGAAAGCTCTTATGGTCATAATACTATTGTCTGTGCTATCGCAAATTTC
TTTTTTAAATTCGCATGCTCTATTTTTGATCTCCCGTTCACCACTGCACGAAACGTTCTT
ATTTGTGATATCTGGTATTGCGTTGTGGATTTGATTACTGGAGCAAGAGACTCGCAATCT
GAAGGAAGGCTATCAGAGAGGTTAATCGGTTTATTTCTTGAGCAAGATGATGATCTCATA
AATATGATGCTTCTTCATCTTCACTTCAGTTGCTCATACTTGAAATGGATACCGAATCAC
GACGAGATAAATGCAAATCCTGATGATATAACTCCGCATCAGCTCTTCTTAACTCTGATG
AAACACCTTTCATTCGATTCCTCCATCATGCTTGACTGGTTAACCTCGGATGAAACTAAA
TTTTTACAATATTTCGTGAAGTACCTGAAGTTTCTGGCATCATCCTCGAACGATTTTTTG
AAAGACTGCTTAGAAATGGATGAATTGAATAAAAACAATGCTTCCAGTGCTGAGGAATTC
AAAAGTTATTCAATCCAATCAGAGAACTGTTTGAATGACCTCACGCAATCTATAAAGCGA
CTCGAGGGAGCTGGACTTTTTCCTTACTCTGCTAAACCTCTTTTGAGGCTTTTAGAAGCT
TGCATACAATTATTTCTGGCATTAAAGTGA

InterProScan

PANTHER
Protein_Lines (IPR024875) - T[35-119] 1.4E-36 - T[342-525] 1.4E-36
Pfam
LINES_N (IPR032794) - T[359-463] 7.3E-19
Pfam
Lines_C (IPR029415) - T[490-521] 7.5E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value