- Transcript 'KH2012:KH.C10.264.v3...' >
- Transcript 'KH2012:KH.C5.439.v1....' >
- Transcript 'KH2012:KH.C8.49.v1.A...' >
- Transcript 'KH2012:KH.C8.49.v1.R...' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2449.g09620.03.t
Possible name(s)
TUBA1A; TUBA1B; TUBA3C
Gene model
Location
S2449 [2,206 / 4,060]
Amino acid sequence
Length: 451
>Haaura.CG.MTP2014.S2449.g09620.03.p
RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR
IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTAV
VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVAQIVSSITAS
LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ
MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT
VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA
REDLAALEKDYEEVGVDSVEGEGEEEGEEY*
Nucleotide sequence
Length: 1,353
>Haaura.CG.MTP2014.S2449.g09620.03.t
CGTGAATGTATCTCTATCCACGTTGGACAAGCCGGTGTCCAGATTGGTAATGCTTGCTGG
GAGTTGTACTGTCTCGAGCATGGTATCCAGCCTGATGGCCAGATGCCAAGTGACAAGACC
ATTGGAGGAGGAGACGATTCTTTCAACACCTTCTTCAGCGAAACTGGCGCAGGAAAACAT
GTCCCGCGTGCGGTTTTCGTCGATCTTGAACCAACCGTAGTTGATGAGGTTCGTACCGGA
ACCTACCGTCAACTCTTCCACCCCGAGCAGCTCATCACCGGTAAGGAGGATGCCGCTAAC
AACTACGCTCGTGGTCATTACACCATCGGAAAGGAAATCGTCGACTTGGTCCTTGATCGT
ATTCGTAAGCTTGCTGACCAGTGTACCGGTCTCCAAGGTTTCCTCATCTTCCACTCGTTC
GGAGGTGGCACCGGATCCGGGTTCACTTCCCTTCTTATGGAACGTCTCTCTGTTGACTAT
GGCAAAAAATCAAAACTTGAATTTGCCATCTACCCTGCTCCTCAGATATCCACCGCTGTC
GTCGAACCATACAACTCTATCTTGACTACTCACACCACCCTTGAGCACTCTGATTGCGCA
TTCATGGTTGACAATGAAGCTATCTACGACATATGTCGTCGTAATCTTGATATTGAACGA
CCAACCTACACCAACTTGAACAGACTCGTTGCTCAAATCGTGTCGTCCATCACTGCATCC
TTGAGATTCGATGGTGCCCTCAATGTCGATTTGACTGAATTCCAGACTAACTTGGTACCA
TACCCCCGAATCCACTTCCCCCTTGCCACCTATGCTCCGGTCATCTCTGCTGAGAAGGCA
TACCACGAACAACTCTCTGTTGCAGAAATTACCAACGCCTGCTTCGAACCGGCCAACCAG
ATGGTAAAATGCGATCCACGTCATGGCAAGTACATGGCGTGCTGCATGTTGTACCGTGGT
GATGTTGTCCCCAAGGACGTCAACGCTGCCATTGCGACCATCAAGACCAAGAGAACCATC
CAATTCGTCGATTGGTGTCCAACTGGTTTCAAGGTTGGTATCAACTACCAGCCACCCACC
GTTGTGCCAGGTGGTGATCTTGCGAAGGTCCAGCGTGCCGTCTGCATGTTGAGCAATACC
ACAGCTATTGCAGAGGCATGGGCTCGTCTTGACCATAAATTTGACTTGATGTACGCCAAG
CGTGCTTTCGTCCATTGGTACGTCGGTGAGGGTATGGAGGAAGGTGAATTCTCCGAGGCC
CGTGAGGACTTGGCTGCTCTTGAGAAAGATTACGAAGAGGTCGGTGTCGATTCCGTAGAG
GGCGAGGGCGAGGAGGAAGGAGAGGAGTATTAG
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-267] 6.1E-132 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-243] 6.54E-101 |
| PANTHER |
Tubulin (IPR000217) - T[1-446] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[2-212] 2.7E-68 |
| PRINTS |
Tubulin (IPR000217) - T[9-29] 1.0E-90 - T[52-71] 1.0E-90 - T[94-105] 1.0E-90 - T[107-131] 1.0E-90 - T[133-151] 1.0E-90 - T[152-173] 1.0E-90 - T[177-190] 1.0E-90 - T[191-211] 1.0E-90 - T[379-407] 1.0E-90 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[17-32] 4.6E-121 - T[44-57] 4.6E-121 - T[87-100] 4.6E-121 - T[119-127] 4.6E-121 - T[147-159] 4.6E-121 - T[160-171] 4.6E-121 - T[213-225] 4.6E-121 - T[273-288] 4.6E-121 - T[320-341] 4.6E-121 - T[346-359] 4.6E-121 - T[359-378] 4.6E-121 - T[384-400] 4.6E-121 - T[421-437] 4.6E-121 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[48-245] 1.3E-83 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[141-147] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[245-436] 4.88E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[247-392] 1.8E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[262-390] 2.9E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[268-382] 7.6E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[383-449] 1.4E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 98 % | 934 | 0 |
| TBA1B_HUMAN | 97.778 % | 934 | 0 |
| TBA3C_HUMAN | 98.222 % | 923 | 0 |