- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Cisavi.CG.ENS81.R15....' >
- Transcript 'KH2012:KH.L141.6.v4....' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2363.g09551.01.t
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
S2363 [11,899 / 13,057]
Amino acid sequence
Length: 386
>Haaura.CG.MTP2014.S2363.g09551.01.p
QLGDNLDFGFPFSADTASMSPVGAFDNIAPLNNASLSGMWSTQTPAGVHRRNSTSSVSSS
ASIRNRMNMNSLTSVANIIPETATITAAAATIFNSVSEERFRSRAYSEGASSLSLDQQQP
QQQPLASSRYKTELCRPFEENGKCKYGDKCQFAHGKQELRQLIRHPKYKTELCRTFHTSG
FCPYGPRCHFIHNQEDLGNRMSTNMQSSSTMHQTSHQTAYNHGISSQSGMPIPVPSPHVS
ERNHFNHRPSQLTVLTKQLSCGPTFGGMSYSPTNQSPGGSPTFYQRNSDLECSTLLSPTS
PNAGKQIMFNFNVPTTNSLMYEQSTPPVSSYDMFPTQGCIQDAPVADDAFSSPPTPPDSD
RESMTGSPPSRQQRLPIFRCLSQSD*
Nucleotide sequence
Length: 1,158
>Haaura.CG.MTP2014.S2363.g09551.01.t
CAGTTAGGCGATAATTTGGATTTTGGATTTCCATTCTCCGCCGATACCGCAAGCATGTCG
CCGGTCGGCGCATTCGACAACATCGCACCGCTAAATAACGCCTCCTTGAGCGGCATGTGG
TCAACTCAAACACCGGCCGGTGTTCATCGACGGAATTCCACCTCGTCTGTTTCTTCAAGT
GCGTCCATTAGGAATCGAATGAACATGAACTCGTTAACGTCAGTCGCTAATATCATCCCC
GAGACTGCAACCATTACGGCAGCGGCGGCGACAATCTTTAATTCGGTGTCGGAGGAAAGA
TTCCGTAGTCGGGCATACAGCGAAGGTGCCAGTTCCCTTTCCCTTGACCAGCAACAACCG
CAACAACAGCCTTTAGCTTCAAGTCGTTATAAGACCGAACTGTGCAGACCTTTTGAGGAA
AATGGAAAGTGCAAGTACGGAGACAAGTGTCAATTTGCTCATGGTAAACAAGAGCTACGC
CAACTAATCAGGCACCCCAAGTACAAAACCGAACTATGCCGCACATTCCACACCAGCGGA
TTCTGTCCATACGGTCCGCGATGCCATTTCATTCACAACCAAGAGGATTTGGGCAATCGT
ATGTCAACAAACATGCAGTCTTCCAGTACAATGCACCAAACTTCACACCAAACCGCCTAC
AATCACGGAATCTCCTCGCAGTCGGGCATGCCCATCCCTGTCCCTTCTCCTCATGTGTCA
GAAAGAAACCATTTCAATCACAGACCATCCCAGTTGACAGTTCTAACCAAACAGCTGAGC
TGCGGACCAACTTTCGGCGGCATGTCCTACTCTCCCACAAACCAGAGTCCCGGTGGTTCT
CCCACTTTCTACCAGCGGAACAGCGATTTGGAATGTTCAACCCTTCTTTCACCAACTTCG
CCTAATGCTGGGAAGCAAATCATGTTCAATTTCAACGTTCCCACGACCAACAGCCTCATG
TACGAGCAGTCCACTCCACCGGTGTCCAGTTATGATATGTTTCCGACTCAGGGATGTATT
CAGGATGCGCCGGTGGCAGATGATGCTTTTAGCAGTCCACCCACTCCACCAGATTCAGAC
CGTGAATCTATGACTGGGTCGCCACCCTCGAGACAGCAGCGCCTTCCCATATTTCGCTGT
CTGTCCCAATCCGACTAG
| Pfam |
Tis11B_N (IPR007635) - T[41-119] 9.8E-5 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[129-160] 3.4E-10 - T[164-196] 1.44E-10 |
| SMART |
Znf_CCCH (IPR000571) - T[129-156] 3.1E-9 - T[167-194] 8.3E-9 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[129-157] 17.262 - T[167-195] 16.004 |
| Pfam |
Znf_CCCH (IPR000571) - T[130-156] 5.2E-11 - T[168-194] 7.7E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 53.529 % | 167 | 1.22E-48 |
| TISD_HUMAN | 62.857 % | 142 | 8.17E-38 |
| TTP_HUMAN | 72.857 % | 116 | 1.71E-29 |