- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2330.g09508.02.t
Possible name(s)
NFX1; NFXL1; ZNFX1
Gene model
Location
S2330 [4,069 / 7,252]
Amino acid sequence
Length: 1,061
>Haaura.CG.MTP2014.S2330.g09508.02.p
MNQGNEYSDWSPCDYPPQVADGAEETERAAQEGRSSSNESVGKSRRFSKQRNIKDSSDGN
YTMKATQKKIPKHEIRFSHQKNQDVSQKRQEYGMPSNDAKSQQEDDRSGGQETSKFSIIR
SIGNRDVDTGFTENQSENAMGSTSKNSKPTRRRNERVSAFQTTESQISVLLEQLTSGTYE
CMVCCDRVKQQHAIWNCEECHHAFHMGCIKKWARSPAASIENEGWRCPGCQNISKKFPST
YRCFCGKVNEPDWNRRETPHSCGEICGKKRKNNATCTHPCNILCHPGPCPACPASVIKAC
LCGKMTRKVRCSQVKPLKCLEQCGKKKNCGLHICETICHAESCDSCDVNAEQTCFCGKAL
RSVLCGSEQFKMGESHKGQKVFSCEGVCDKLLDCGNHYCESVCHPGDCKRCFLLPSVIKT
CPCTQTLLVNMVDDSGNKIDRKSCEDPIPECGKTCGKPLKCGGEEIHTCQLKCHSDECPP
CPDGESTMKCRCGKSEKDVSCSEITDELYVCDRRCNKKRKCGRHKCGKTCCTDIEHVCSQ
PCGRKLECKLHRCEETCHRGVCHTCYNVSFEELSCHCGAEVLFPPIQCSTKPPECTNQCT
RSHPCNHNVNHNCHNEEKCPPCVVLVHKPCNCGKVIRKNIPCHQENVSCGDACKRSLPCG
HRCPKPCHKQQCLAEDEKCKQPCSIMRVECIHPCANPCHESAPCPQSPCKAMVTLRCSCS
LQEKQVECFNGGAMYQRLSSEAIAMQQHKGHSVDISPLFSNGSGKQRMLQCNEECSTMER
NRRLAEALNIKDPEMTAFEPHVYSTFLLNYVKQDHAFVRGVEQDLTNLVEAVEWLDKNKR
NHAFPPMRREKRQVVHDLAEAFQCKSLSCDEEPNRSVTVTAVRGVSKIPRTLLSDTAKKS
LYPFPKNSDTQTGVSGRKPIEGKKRLLSSMKLVSMTSSSPGEKLKFHDPDQETKRPISIP
RMPSYPGVGKLSSLCAARKTYGPKLSDHFSQIEGSSDTGIHNVSSQSRDFTNERQSKESS
ASSRMHIQNLESYSSSAQKAKAPTQSNFHQPDIDYFDMTE*
Nucleotide sequence
Length: 3,183
>Haaura.CG.MTP2014.S2330.g09508.02.t
ATGAATCAAGGTAACGAATACAGCGACTGGTCACCATGTGATTATCCCCCACAGGTTGCA
GATGGAGCTGAGGAAACTGAAAGAGCTGCGCAGGAAGGGAGGTCATCCAGCAACGAAAGC
GTTGGAAAATCTCGACGGTTCAGTAAACAGAGAAATATAAAAGACAGCTCGGACGGAAAC
TATACTATGAAAGCAACGCAGAAGAAAATTCCAAAGCACGAAATTCGGTTCAGCCATCAG
AAAAATCAAGACGTCAGCCAAAAAAGGCAGGAATACGGGATGCCGTCAAACGATGCAAAA
TCTCAACAGGAAGATGACAGATCTGGCGGCCAGGAGACATCTAAGTTTTCTATAATTCGA
AGTATTGGTAACAGAGATGTCGATACTGGATTCACGGAGAATCAGAGTGAAAATGCAATG
GGGAGTACCAGTAAGAATTCTAAGCCGACCAGACGTAGAAACGAAAGAGTGAGCGCTTTT
CAAACTACAGAAAGCCAGATCAGCGTTCTGCTGGAACAGTTGACTAGTGGCACATACGAA
TGCATGGTATGTTGCGATCGTGTCAAGCAGCAGCATGCTATATGGAATTGTGAAGAGTGC
CATCACGCGTTTCACATGGGATGCATTAAGAAATGGGCGAGGTCCCCGGCGGCGAGCATA
GAGAATGAAGGATGGAGGTGTCCCGGTTGCCAGAACATTAGCAAGAAATTTCCCAGCACA
TACAGATGCTTCTGTGGAAAAGTAAACGAGCCTGACTGGAATCGCAGGGAGACTCCTCAC
TCGTGCGGAGAGATTTGCGGCAAGAAACGTAAGAACAACGCTACGTGCACTCATCCGTGT
AACATCCTATGTCATCCCGGACCTTGCCCTGCTTGCCCCGCCAGCGTGATCAAAGCGTGC
CTGTGCGGGAAAATGACAAGGAAGGTCCGGTGCAGTCAGGTCAAGCCCCTCAAGTGTCTT
GAACAGTGTGGCAAAAAGAAGAATTGCGGCTTGCACATTTGCGAGACGATATGCCACGCG
GAGTCTTGCGACTCGTGCGATGTGAATGCAGAGCAGACATGTTTCTGTGGTAAAGCCTTG
CGTTCCGTCTTGTGCGGATCCGAACAATTCAAGATGGGAGAATCTCATAAGGGGCAGAAG
GTTTTTAGCTGCGAAGGTGTGTGTGATAAATTGCTCGACTGTGGAAATCATTACTGTGAA
TCGGTCTGTCATCCCGGGGACTGCAAACGTTGCTTTTTACTGCCGTCCGTGATTAAAACA
TGTCCATGTACTCAAACCTTGCTGGTGAATATGGTGGACGATAGCGGGAATAAAATTGAT
AGAAAGTCATGCGAAGATCCCATCCCTGAATGTGGCAAGACTTGCGGAAAACCATTGAAA
TGTGGGGGTGAAGAGATCCATACCTGCCAATTGAAATGCCACTCTGACGAATGCCCGCCG
TGCCCGGACGGGGAGTCGACAATGAAATGCCGTTGTGGAAAATCGGAGAAAGACGTCTCT
TGCTCGGAAATTACCGACGAGCTTTATGTTTGTGATCGTAGGTGCAATAAAAAACGGAAG
TGCGGGCGACATAAGTGTGGTAAGACGTGCTGCACGGACATCGAACATGTGTGCAGCCAG
CCTTGTGGGAGAAAGCTCGAGTGTAAGTTACATCGCTGCGAAGAGACCTGCCATAGAGGT
GTTTGTCACACTTGCTACAATGTCAGCTTCGAGGAGTTATCGTGTCACTGCGGTGCTGAA
GTGTTATTTCCACCCATTCAATGCAGCACCAAGCCACCAGAGTGCACCAATCAATGTACA
AGATCTCATCCATGTAATCACAATGTAAACCATAACTGCCACAACGAGGAAAAATGTCCT
CCGTGTGTCGTTCTAGTGCACAAACCATGTAACTGCGGTAAAGTGATCCGGAAAAACATC
CCCTGTCATCAGGAAAATGTCTCCTGCGGCGATGCTTGCAAGAGGTCGTTGCCATGTGGA
CACCGTTGTCCGAAACCCTGTCACAAACAGCAATGTCTTGCGGAAGATGAAAAATGTAAG
CAGCCATGCAGCATCATGCGTGTGGAATGCATCCACCCGTGCGCGAATCCTTGCCACGAA
TCTGCTCCCTGTCCCCAATCTCCTTGCAAGGCCATGGTAACTCTCCGGTGTAGTTGCAGC
CTCCAGGAAAAACAAGTGGAATGTTTTAACGGCGGAGCGATGTACCAGAGGTTGTCTTCT
GAAGCTATCGCTATGCAACAGCACAAAGGGCACTCGGTTGATATCAGTCCCCTGTTCAGC
AATGGCTCCGGAAAACAAAGGATGCTGCAGTGCAATGAAGAGTGCAGCACCATGGAGAGA
AACAGAAGATTGGCAGAAGCGCTAAACATCAAAGATCCAGAAATGACTGCGTTTGAACCG
CATGTATACTCTACTTTTCTACTAAATTATGTCAAACAAGACCATGCCTTTGTCCGCGGC
GTTGAACAAGACCTCACGAATCTAGTGGAAGCGGTTGAGTGGCTTGATAAGAACAAGAGG
AACCACGCTTTTCCTCCAATGAGGAGAGAGAAACGTCAGGTAGTTCATGATTTGGCCGAA
GCTTTCCAATGCAAATCGTTGAGTTGCGACGAAGAACCTAACAGGAGTGTGACGGTCACA
GCAGTTCGTGGAGTAAGCAAGATACCTAGAACCCTCCTCAGCGACACTGCAAAAAAATCA
TTGTATCCATTCCCGAAAAATTCCGATACCCAAACAGGAGTGAGCGGTCGGAAACCCATC
GAAGGAAAGAAAAGGTTGCTCAGTTCGATGAAACTTGTTTCGATGACGTCATCTTCCCCG
GGAGAAAAGCTCAAATTTCATGACCCCGACCAAGAAACCAAACGGCCTATTTCCATACCC
AGAATGCCAAGTTATCCCGGCGTCGGGAAACTGTCGAGCTTGTGTGCCGCCAGGAAGACC
TACGGCCCCAAACTGTCTGACCATTTCAGCCAGATTGAGGGTTCTTCCGACACTGGAATT
CACAATGTCAGCAGCCAATCGAGAGATTTTACGAACGAAAGGCAGAGTAAGGAATCCTCG
GCAAGTAGCAGAATGCACATTCAAAATTTGGAAAGTTATTCCTCGTCTGCTCAGAAAGCT
AAAGCCCCAACTCAGAGTAATTTCCATCAACCTGATATTGATTACTTTGATATGACTGAA
TAA
| PANTHER |
NFX1_fam (IPR034078) - T[27-1032] 3.5E-286 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[178-233] 9.41 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[181-230] . |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[181-231] 11.221 |
| SMART |
Znf_NFX1 (IPR000967) - T[276-294] 0.096 - T[329-348] 0.16 - T[394-413] 0.0016 - T[461-483] 0.012 - T[521-540] 16.0 - T[548-567] 0.94 - T[605-624] 8.6 - T[632-655] 210.0 - T[659-681] 0.61 - T[690-711] 1.7 |
| Pfam |
Znf_NFX1 (IPR000967) - T[277-293] 0.16 - T[329-346] 0.11 - T[394-411] 7.1E-6 - T[461-482] 0.15 - T[521-531] 18.0 - T[542-565] 1.3 - T[659-683] 0.03 - T[691-710] 20.0 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[800-900] 3.53E-15 |
| SMART |
R3H_dom (IPR001374) - T[804-882] 1.3E-8 |
| Gene3D |
R3H_dom_sf (IPR036867) - T[810-887] 6.6E-11 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[815-883] 12.856 |
| Pfam |
R3H_dom (IPR001374) - T[817-880] 2.9E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NFXL1_HUMAN | 36.117 % | 230 | 1.03E-62 |
| NFX1_HUMAN | 46.974 % | 681 | 0 |
