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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S7...' > 
  2. Transcript 'Mooccu.CG.ELv1_2.S62...' > 
  3. Region 'REG00000873' > 
  4. Transcript 'KH2012:KH.C2.175.v2....' > 
  5. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S2318.g09498.01.t

Possible name(s)

Haaura.CG.MTP2014.S2318.g09498

Gene model

Haaura.CG.MTP2014.S2318.g09498

Location

S2318 [12 / 10,695]

Sequences

Amino acid sequence

Length: 942

>Haaura.CG.MTP2014.S2318.g09498.01.p
LAELFKTVEPMICMQEESKKFDLEYKISILMNEFKFQEALELLEQLQPMQNDKARKINTL
LMISQCQMKMGLTHSSALELDALPIEIEPMLRDVEGKIKSQLTKIECYMMMEQHRKDYQR
EVEFNESAIELMKKQLKEDAEKICLLRNMAELFKTVEPTICMQEESKKFDLEYKIPILMN
ESKFQKALELLEQLQPMQNDKARKINTQLMISHCQIKSGLPHGSAIELEKLITLSSVQPD
DLKVTANNDIKQKKYVRAFLYYFSASKFYKEIHLGDDAAQGIKACVQAVEMFVEEMIKQD
DDCEDYQQFADNVESAIKLLKRELKEDADKYRVFGICLHSSGEAHEKLDQKGPAMYLYER
AIEAKNDANDWPNDQSKHDSREMTQEKLRNIVEFYEAKLGDSRNLIKTSKFSEALDLLLE
IEPFLRDVDTKIKAQLTKIECYLMMEQHLKVARQLDELVRLMLSSKKSAGDVMKIAEDDI
TAKLYISGFLCYFSACKLYKEKSAGNDAEKGIKACVRDVQLFVEKMINQDEKMKQIVIDY
IIPALKEVTDDLIKIPNADPRYQVRLQAWCLQSIGLCYKHCEDYQQFADNVESAIELLKR
ELKEDVDKYRVFGICLHSYGEAHEKLDRKGQAMALYERAIEAKNDANDWPNDSNKLDSKE
LSREMLKNIVNNAFDDSRILIKTSKFSGAVNFLREIEPMLRDVEGKIKAQLMKIECYMMM
VKPLKVVRQLDELVRLMLSSKKTVADVMKMAKDDATAELYISGYLRYFSACKLYKEKSSG
NDAVKGIKACVVAVQLSVGRMINQDGKMKKIVTDYIIPALEEVTDELSEIPNSDQEVQVE
QQAWCLFNIAQCYSDCQDYQQYAEFNESAIELMKKQLKEDAEKNCMVGHCYNNAGAAYER
FNQKEKSKEMFRKALDVYNKATDWPDEETKKEDIERTENNLR

Nucleotide sequence

Length: 2,826

>Haaura.CG.MTP2014.S2318.g09498.01.t
TTGGCTGAATTGTTCAAAACTGTCGAACCAATGATCTGCATGCAAGAAGAATCCAAGAAA
TTTGACTTGGAATACAAAATATCGATTCTCATGAATGAATTCAAGTTCCAGGAAGCTCTC
GAACTTCTTGAACAACTTCAACCGATGCAAAATGATAAAGCAAGGAAGATAAACACCCTA
CTCATGATATCACAATGTCAAATGAAAATGGGATTGACACACAGTAGCGCTTTAGAGCTG
GACGCTCTTCCGATTGAAATCGAACCGATGCTCAGAGATGTGGAAGGAAAAATAAAATCT
CAGCTGACAAAAATAGAATGTTACATGATGATGGAGCAACATCGTAAGGATTATCAACGA
GAAGTCGAGTTTAATGAATCTGCAATTGAACTGATGAAAAAACAATTGAAGGAAGATGCT
GAGAAAATCTGTTTGTTGCGCAACATGGCTGAATTGTTCAAAACTGTCGAACCAACGATC
TGCATGCAAGAAGAATCCAAGAAATTTGACTTGGAATACAAAATACCGATTCTCATGAAT
GAATCCAAGTTCCAGAAAGCTCTCGAACTTCTTGAACAGCTTCAACCGATGCAAAATGAT
AAAGCAAGGAAGATAAACACCCAACTTATGATATCGCATTGTCAGATAAAATCGGGATTG
CCACACGGTAGCGCTATAGAGCTGGAAAAGCTGATTACATTATCATCGGTGCAACCAGAC
GACTTGAAAGTAACGGCAAATAACGACATCAAACAAAAGAAATATGTTCGAGCATTTCTT
TACTATTTCTCGGCGAGTAAATTTTACAAAGAAATACATCTTGGTGATGATGCAGCGCAA
GGTATCAAGGCATGTGTACAAGCTGTTGAGATGTTTGTGGAAGAAATGATCAAACAGGAT
GACGATTGCGAAGATTATCAACAATTTGCCGACAATGTTGAATCTGCCATCAAGCTCTTG
AAGAGAGAATTAAAGGAAGATGCCGATAAATATCGGGTATTTGGAATTTGTCTTCATAGT
TCTGGCGAAGCTCATGAGAAATTGGATCAAAAGGGACCGGCAATGTATCTGTATGAAAGA
GCTATCGAGGCAAAGAACGATGCAAATGACTGGCCGAATGATCAGAGTAAACATGACAGT
AGGGAGATGACACAGGAAAAGCTGAGGAATATAGTAGAATTTTATGAAGCCAAGTTAGGT
GACTCAAGAAACCTAATAAAGACATCCAAGTTCTCTGAAGCCCTGGATCTTCTTCTTGAA
ATTGAACCGTTCCTCAGAGATGTGGACACAAAAATAAAAGCTCAGCTGACAAAGATAGAA
TGTTACCTGATGATGGAGCAACATCTTAAGGTGGCTAGACAGTTGGATGAACTTGTTCGA
CTGATGCTTTCATCAAAGAAATCAGCCGGTGATGTCATGAAAATCGCGGAAGATGACATC
ACAGCGAAGCTGTACATAAGTGGATTTCTTTGTTATTTCTCTGCTTGCAAATTATACAAA
GAGAAATCTGCTGGGAATGATGCAGAGAAAGGTATCAAAGCATGTGTGCGGGATGTGCAA
TTGTTTGTGGAGAAAATGATCAACCAAGATGAAAAGATGAAGCAGATTGTCATTGATTAC
ATCATCCCAGCACTGAAAGAAGTCACTGATGATCTGATCAAAATCCCAAATGCAGATCCA
AGATATCAAGTCAGATTGCAAGCCTGGTGTTTACAAAGCATTGGATTGTGCTACAAACAT
TGCGAAGATTATCAACAATTTGCCGACAATGTTGAATCAGCCATCGAGCTCTTGAAGAGA
GAATTAAAGGAAGATGTCGATAAATATCGGGTGTTTGGAATATGTCTTCATAGTTATGGT
GAAGCTCATGAGAAATTAGATCGAAAGGGGCAAGCAATGGCTCTGTATGAAAGAGCTATC
GAGGCAAAGAACGATGCAAATGACTGGCCGAATGATTCGAATAAACTTGACAGTAAGGAG
CTGTCGCGGGAAATGCTGAAAAATATAGTGAACAACGCGTTCGATGATTCAAGGATCCTA
ATAAAGACATCCAAGTTCTCTGGAGCTGTCAATTTCCTTCGTGAAATCGAACCCATGCTC
AGAGATGTGGAAGGAAAAATAAAAGCTCAGCTGATGAAGATAGAATGCTACATGATGATG
GTAAAACCTCTTAAGGTGGTTAGACAGTTGGATGAACTTGTTAGACTGATGCTTTCATCA
AAGAAAACAGTCGCTGATGTCATGAAAATGGCAAAAGATGATGCCACTGCGGAGCTTTAT
ATAAGTGGATATCTTCGTTATTTCTCTGCATGCAAATTATACAAAGAGAAATCTTCTGGG
AATGATGCAGTGAAAGGTATCAAAGCATGTGTGGTTGCTGTGCAACTGTCAGTTGGGAGA
ATGATCAACCAAGATGGAAAGATGAAGAAGATTGTGACGGATTATATCATCCCAGCACTG
GAGGAAGTCACCGATGAGCTAAGCGAAATCCCAAATTCAGATCAAGAAGTTCAAGTTGAG
CAACAGGCTTGGTGTTTGTTCAACATTGCGCAGTGTTACAGCGACTGCCAGGATTATCAA
CAATATGCCGAGTTTAATGAATCTGCAATTGAACTGATGAAGAAACAATTGAAGGAAGAT
GCTGAGAAGAATTGCATGGTTGGACATTGCTACAACAATGCTGGTGCAGCTTATGAACGC
TTCAATCAAAAAGAGAAATCAAAAGAAATGTTCAGAAAAGCACTTGATGTTTACAACAAA
GCAACTGACTGGCCTGATGAGGAAACAAAGAAGGAAGACATCGAGCGCACAGAAAATAAT
CTGAGA

InterProScan

SMART
TPR_repeat (IPR019734) - T[335-368] 150.0 - T[568-601] 150.0 - T[613-646] 43.0 - T[843-876] 170.0 - T[888-921] 7.7
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[544-706] 1.8E-8 - T[830-941] 7.2E-11
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[568-650] 4.11E-14 - T[841-926] 4.11E-14
Pfam
TPR_repeat (IPR019734) - T[845-877] 0.028

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value