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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S2273.g09450.01.t

Possible name(s)

SLCO4A1; SLCO4C1; SLCO5A1

Gene model

Haaura.CG.MTP2014.S2273.g09450

Location

S2273 [1,728 / 7,443]

Sequences

Amino acid sequence

Length: 676

>Haaura.CG.MTP2014.S2273.g09450.01.p
SITSSSSSSSTSSCAMDLDSNENNQEKKRENETTALQTKQQKAEQTAAVPVTVSSNGITK
DSCGYGARCHPRWLQFFYSAKWFLVFMCLIILLQNSLVYGYLSSVLPTIEKRYGLKSAET
GLIHLGFDIGSLLVVVFVSYFGGRGHRPRWIGIGAVFMAIGAGLFSTPQFFSSPYEIPKV
ALTDIVHKHLCLNQSVTNSSLNNTQCEAQVCDVNSGYIPLFVIAVVLMGMGAAPIYPLGI
TFIYDNGERHTSSMYIAIVYIMSGVGPPLGYVLGGMLTGYYVDLGVEGVPSSDPRFIGAW
WSGFVLFAALILPSAIPFLGYPQKLPQPPSQLSSGSSPVTDDNEEDMKACMKCGKNLKDL
LRASISLLTNPTYLCVTAAGILELSTAAAVLALVPKYMLTEFSIDPFQSNILIYLGIVLL
PSLAGGILIGGYVIKHFRLNKTECARFGMICIIACFFVLLVALFIHCPASDFMGIDESCM
NCNCESTLYNPICLKNVNFYNPCTAGCSDVLRHDNGTQIEPITYTGCDCDGLNITATPGI
CDRDCTHTLIPIFACFFFIILASSCALIPGLIVTFRCVKYDERTLAMGLQFVFFRTLGFI
PSKIYFRSAIDEVCLIWVGSTDVCEGESDVCQVYNADFFHYIVFGLLLGLQSLSVIFVSI
AWYLCRKKDMRNHKTK

Nucleotide sequence

Length: 2,028

>Haaura.CG.MTP2014.S2273.g09450.01.t
TCGATTACATCATCATCTTCTTCTTCATCTACATCTTCCTGTGCCATGGATTTAGATTCA
AATGAAAACAACCAGGAGAAGAAGAGGGAAAATGAAACCACCGCACTGCAGACGAAACAG
CAAAAAGCTGAGCAAACTGCTGCCGTTCCTGTAACCGTATCAAGCAACGGTATTACGAAG
GATTCATGCGGATATGGGGCTCGTTGTCACCCGCGCTGGCTTCAGTTTTTCTATTCTGCA
AAATGGTTCCTCGTTTTCATGTGCCTGATTATTCTTTTACAAAATAGTCTCGTTTACGGA
TACCTTAGCAGTGTTTTACCAACCATAGAAAAGAGGTATGGATTGAAGAGCGCTGAGACC
GGACTTATTCATTTAGGTTTTGATATCGGCAGTCTTCTTGTTGTTGTTTTCGTTTCCTAC
TTTGGGGGCAGAGGTCACAGACCGAGATGGATCGGAATCGGTGCTGTATTTATGGCGATA
GGAGCTGGATTGTTCTCGACACCTCAGTTCTTCTCGTCTCCCTACGAGATTCCAAAAGTT
GCATTGACTGACATCGTGCACAAACATCTCTGTTTGAACCAGTCCGTGACAAACAGCAGT
TTGAATAACACACAATGTGAAGCACAGGTATGTGATGTTAATTCTGGTTACATACCTCTC
TTCGTGATTGCTGTCGTGCTCATGGGAATGGGTGCAGCTCCGATCTACCCACTCGGTATA
ACGTTTATATATGACAATGGTGAACGACATACCTCATCGATGTATATCGCTATTGTGTAC
ATCATGTCAGGAGTTGGACCTCCACTAGGATACGTTCTTGGCGGCATGCTGACTGGCTAC
TATGTTGACCTAGGTGTCGAAGGTGTCCCATCCAGTGATCCGAGATTTATTGGAGCTTGG
TGGTCTGGTTTCGTTCTATTCGCTGCTCTGATTTTGCCTTCAGCTATTCCGTTTCTTGGA
TACCCGCAGAAGCTTCCGCAACCTCCTTCTCAACTAAGCAGTGGTTCATCCCCTGTTACT
GATGATAATGAGGAAGATATGAAAGCTTGTATGAAATGTGGGAAAAATCTCAAAGATTTA
CTGCGTGCTTCCATATCACTCCTCACCAACCCCACCTATCTTTGCGTTACAGCAGCAGGA
ATATTAGAACTGTCCACTGCCGCAGCAGTCCTGGCGCTCGTGCCAAAATATATGCTGACT
GAGTTTAGCATTGACCCATTTCAATCTAATATTTTAATTTATTTGGGAATTGTTCTGCTC
CCAAGTTTAGCTGGAGGTATTTTGATCGGTGGATACGTCATCAAACATTTCCGACTCAAC
AAAACCGAATGCGCAAGATTTGGGATGATATGCATCATTGCCTGTTTTTTTGTGCTTCTT
GTGGCTCTCTTCATCCACTGTCCAGCATCCGATTTTATGGGGATCGATGAGTCGTGCATG
AATTGCAACTGCGAATCAACTTTATACAACCCGATCTGTCTCAAGAATGTTAATTTTTAT
AATCCATGCACAGCTGGATGTTCTGATGTATTGAGGCATGATAATGGAACACAGATCGAA
CCAATCACATACACAGGCTGCGATTGCGATGGACTCAACATAACAGCAACACCGGGGATT
TGTGATCGAGATTGCACACACACGCTCATACCAATATTTGCGTGCTTCTTCTTCATCATC
TTGGCTTCGAGCTGTGCATTGATTCCAGGGCTGATAGTTACTTTTCGATGCGTCAAATAT
GATGAAAGAACGTTAGCGATGGGATTGCAGTTTGTATTTTTTAGAACACTCGGCTTTATC
CCTTCCAAAATCTACTTTCGTTCAGCAATTGATGAAGTTTGTCTTATATGGGTTGGATCA
ACGGATGTATGTGAAGGTGAATCTGATGTATGTCAGGTATACAATGCGGATTTCTTCCAT
TACATTGTCTTCGGTCTCTTGTTAGGGCTGCAATCTCTCTCTGTTATTTTCGTGTCCATC
GCATGGTATCTGTGTCGGAAAAAAGACATGCGTAATCACAAGACAAAA

InterProScan

PANTHER
OATP (IPR004156) - T[54-674] 1.6E-169
TIGRFAM
OATP (IPR004156) - T[61-667] 7.4E-118
SUPERFAMILY
MFS_trans_sf (IPR036259) - T[72-176] 4.05E-29 - T[221-469] 4.05E-29 - T[547-601] 4.05E-29
Pfam
OATP (IPR004156) - T[82-638] 5.0E-144
CDD
MFS_dom (IPR020846) - T[85-325] 2.61932E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SO4A1_HUMAN 29.522 % 272 1.9E-81
SO4C1_HUMAN 29.096 % 284 6.55E-86
SO5A1_HUMAN 36.446 % 362 3.06E-114