- Transcript 'KH2012:KH.C1.1268.v1...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S224.g03456.01.t
Possible name(s)
BMP2; BMP3; GDF10
Gene model
Location
S224 [66,144 / 71,330]
Amino acid sequence
Length: 773
>Haaura.CG.MTP2014.S224.g03456.01.p
MHQSLVHIVCCLFLQYVLISADPLASEFKGLREDENEFLSGKNFTVLPLSLPIPKFLDQN
LSESTPFPSQTHPVVVADAKNTKTATRPGSSQKNRRRKGKRNKNGKRIKSNRASNNPRKN
SQDFEESKDLEDQKEILRSTMRYMFGFDHMLTTPEMVKQKVVAENVGDKSDEQSSGEATK
LKGQNGKEDEKLEALDLPEPPDFMLELYETYSKDNNLMMLHSRSQGDTIRSFFPSPADPR
FREKDRGRPVIIVPVVERDGGPKGALGREVRNGFQPDNRMPAFLFNLSSIPSEEELVSVE
IRLDGRAKNYRSNFPSFQQDGGLGSDEANNTHPSSWNLKIGVYKIGRISCRDEIDCSADD
ISKIFIKVGRTVVISSPAITTWSDKELVLLARKARKLDHVMLVKFTRDPSAPNNTEELSR
SSRHIKKPSENGNEQHHTSKDLPNTFTVPESERPKRNSDRTKSLASAQPFLSEPSQFGKD
FNALDLLDSEFDITQVPMLIIYSNDSRTVEATEAPQISPLIWGALENVTASLTRRTRRSI
DNISEMEENQLPEAAGVDDTREYDPNIMQTESDKRRRPFVVKKGKAQNRQTKRINNSLSN
DQTELHDNEKSRRLLMDTLKDKRRRRKNKKCEDRKGRRRKGCRKGKKGKGKNIPPHESLE
ALNRAHLLCGRRSLHVDFADIGWSDWIISPNYFDAYYCSGRCEIPHMQSMQGTSNHAIIQ
ALIKAIGVNKEIPAPCCVPEKLMSLSVLYYDEEKNVVLKVYRNMSVETCSCR*
Nucleotide sequence
Length: 2,319
>Haaura.CG.MTP2014.S224.g03456.01.t
ATGCATCAATCTTTAGTCCATATTGTCTGCTGCTTATTTTTACAATATGTATTAATTTCG
GCTGATCCGCTAGCATCGGAGTTTAAAGGCCTTCGTGAGGATGAAAATGAGTTTTTGTCC
GGGAAAAATTTTACTGTGCTCCCGTTGTCTTTACCGATTCCAAAATTTCTTGATCAGAAC
CTATCCGAATCAACGCCCTTTCCGTCGCAAACACACCCTGTTGTTGTCGCCGATGCAAAA
AATACCAAAACAGCCACACGACCGGGATCGTCGCAGAAAAATCGACGAAGAAAAGGAAAA
CGCAATAAAAATGGAAAGCGGATTAAGAGTAACAGAGCTTCAAACAATCCACGAAAGAAT
TCTCAAGATTTCGAAGAATCGAAAGACTTGGAGGATCAAAAAGAAATTTTACGATCTACA
ATGCGATATATGTTCGGATTTGATCATATGCTAACAACCCCGGAAATGGTGAAGCAAAAA
GTCGTTGCAGAGAACGTAGGGGACAAATCCGACGAACAAAGTAGCGGAGAAGCGACGAAA
TTGAAGGGACAAAACGGAAAAGAAGACGAGAAATTGGAAGCGCTCGATTTACCAGAACCT
CCGGATTTTATGTTAGAACTTTACGAAACCTATTCAAAAGACAACAACTTGATGATGCTC
CACTCTCGTTCACAAGGGGATACCATTCGAAGTTTCTTCCCGTCGCCAGCTGACCCACGT
TTTCGGGAAAAGGACAGAGGACGACCAGTGATTATTGTACCTGTTGTAGAAAGAGATGGT
GGGCCAAAAGGAGCCTTGGGTAGGGAAGTGAGAAATGGTTTCCAACCGGACAACCGAATG
CCCGCTTTTCTGTTCAATTTGAGTTCCATACCGAGCGAAGAAGAACTGGTTTCTGTAGAG
ATACGTCTAGACGGACGAGCCAAGAATTACCGCAGCAATTTTCCCTCATTTCAACAAGAC
GGGGGTTTAGGGAGTGATGAAGCGAACAACACGCATCCGTCCTCTTGGAATCTAAAAATT
GGAGTGTACAAAATAGGACGAATTAGCTGTCGAGACGAGATCGACTGCAGTGCGGATGAC
ATATCGAAAATTTTCATCAAAGTTGGAAGAACTGTTGTGATCAGTTCGCCAGCGATAACG
ACTTGGTCTGACAAAGAGCTCGTTCTCCTTGCTCGGAAAGCCCGTAAGCTCGATCATGTC
ATGTTGGTCAAGTTTACGCGAGATCCCTCTGCGCCTAACAACACAGAAGAACTTTCTCGT
AGTAGCAGACATATAAAGAAACCATCGGAAAATGGCAATGAACAACATCATACATCAAAA
GATCTACCGAATACATTTACCGTTCCCGAAAGCGAACGACCAAAACGGAATAGCGACCGT
ACGAAATCGCTTGCTTCTGCCCAACCATTTTTATCCGAGCCTTCACAATTCGGAAAAGAT
TTCAATGCATTAGATTTACTAGATTCGGAGTTTGACATAACCCAGGTACCCATGCTGATA
ATCTATTCCAATGACTCCCGCACGGTGGAAGCAACGGAAGCTCCACAAATTTCACCACTC
ATATGGGGAGCTTTGGAGAATGTTACAGCATCTCTAACGAGAAGAACAAGGCGTTCCATC
GACAATATATCAGAAATGGAAGAAAACCAATTGCCGGAGGCGGCAGGTGTAGACGACACC
AGGGAGTACGACCCCAATATAATGCAAACAGAGTCAGACAAGAGACGGAGGCCGTTTGTG
GTAAAAAAAGGGAAAGCTCAAAATCGCCAAACGAAACGTATAAATAATTCTCTATCCAAC
GACCAAACGGAACTTCACGATAACGAAAAATCGCGTCGCCTCCTAATGGACACGTTAAAG
GACAAACGTCGCCGTCGAAAAAACAAGAAATGCGAAGATCGTAAAGGGAGACGTAGAAAG
GGTTGCAGAAAGGGAAAGAAGGGCAAAGGAAAAAATATTCCACCACACGAATCTCTGGAA
GCCCTCAATCGCGCCCATTTACTCTGCGGTCGAAGGTCGCTCCATGTTGATTTCGCTGAC
ATCGGTTGGTCAGATTGGATAATCTCCCCCAATTACTTCGACGCATATTACTGTTCTGGA
CGATGTGAGATACCGCATATGCAGTCCATGCAAGGAACCTCTAATCACGCCATTATCCAA
GCTCTCATCAAAGCTATCGGGGTAAATAAAGAGATTCCAGCCCCGTGCTGTGTTCCTGAA
AAACTCATGTCTTTAAGCGTTCTGTATTATGATGAAGAGAAGAATGTTGTTCTGAAAGTT
TATAGAAATATGTCCGTAGAAACCTGCTCGTGTAGATGA
| PANTHER |
TGF-beta-rel (IPR015615) - T[107-772] 5.3E-58 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[649-772] 35.678 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[660-772] 6.9E-36 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[665-772] 9.46E-33 |
| SMART |
TGF-b_C (IPR001839) - T[669-772] 2.0E-50 |
| Pfam |
TGF-b_C (IPR001839) - T[669-771] 1.5E-31 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[687-702] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BMP3_HUMAN | 34.965 % | 160 | 2.26E-42 |
| GDF10_HUMAN | 61.905 % | 153 | 5.78E-40 |
| BMP2_HUMAN | 43.939 % | 121 | 1.43E-29 |