- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2232.g09399.01.t
Possible name(s)
AMY1A; AMY1B; AMY1C
Gene model
Location
S2232 [6,166 / 11,720]
Amino acid sequence
Length: 558
>Haaura.CG.MTP2014.S2232.g09399.01.p
MKLILIFMTLVACASAQWDANFANDRFGIVHLFEWHWDTIADECETVFQDYKIGGVQTSP
PNENRVIDNRPWWERYQPISYILGTRSGDRNAFINMVQRCNAAGVRIYPDIVINHMCGNG
GSGTGTAGSSFNADKNSPDFPGVPYGPTDFNQNNCQSSNGEIQNYGDANQVRNCMLVGLL
DLNQGKDYVRGEMIAFMNDLIDIGVAGFRVDACKHMWPADLNVIFGGLKDLNTDYFEAGR
RAYIFSEVIDQGGEPITASEYTGLGSVTEFKYGINLANNKYALQNLESFGEGWGMLPGSA
ALAFINNHDNQRGHGGGGSIVTFKDPYDLKILTAYMLAWPYGVPRVMSSYYFEDPDQGPP
SSQRGVSEDGSCTNGWVCEHRWRQIRNMFGFATAVIGTSMNDWWTNGNNQIAFARGNKGF
IAINGAGYDMSENLQTGLPQGTYCNVIDGDYTAGGCGGECIAVDSNGNANIFISGGSSDP
IVAIHANAQSDSCNTGETGGGGTGTGTGTGTGGGDTACTDCTCNDKYECGYLGIDGPECE
TQGCLWCPTNDGSSDPWC
Nucleotide sequence
Length: 1,674
>Haaura.CG.MTP2014.S2232.g09399.01.t
ATGAAGTTGATTTTGATTTTCATGACTTTGGTCGCCTGTGCTTCGGCACAGTGGGACGCA
AATTTCGCAAACGATCGCTTCGGTATCGTTCATTTGTTTGAATGGCACTGGGACACAATC
GCTGATGAATGTGAAACTGTCTTTCAAGATTACAAAATTGGAGGAGTTCAGACATCTCCA
CCAAATGAAAACCGTGTCATTGACAACCGACCCTGGTGGGAAAGATATCAACCAATATCA
TATATTCTTGGTACAAGATCAGGAGACAGGAATGCATTCATAAACATGGTCCAACGTTGC
AATGCAGCTGGCGTGAGAATTTATCCAGATATTGTGATCAACCATATGTGTGGAAACGGT
GGCTCAGGAACTGGTACCGCTGGTAGTTCATTCAATGCCGATAAAAACAGTCCAGACTTC
CCTGGTGTCCCATATGGTCCAACTGATTTCAACCAAAACAACTGCCAATCAAGTAATGGA
GAGATTCAAAACTATGGAGATGCAAACCAGGTGCGAAACTGCATGTTGGTCGGCCTGCTG
GATTTAAATCAAGGAAAAGACTATGTGAGAGGTGAAATGATCGCTTTTATGAATGACTTG
ATCGACATTGGAGTTGCTGGATTCCGTGTCGACGCCTGCAAGCACATGTGGCCTGCAGAT
TTAAATGTCATATTCGGAGGACTAAAAGATCTGAACACCGATTACTTCGAGGCAGGGAGG
AGAGCATATATTTTCTCTGAAGTGATTGACCAAGGAGGAGAACCTATCACTGCAAGTGAA
TACACTGGACTTGGATCAGTAACAGAGTTTAAGTACGGGATTAACCTTGCAAACAACAAA
TATGCACTTCAGAACTTGGAAAGCTTCGGAGAAGGATGGGGAATGTTGCCAGGATCAGCA
GCCTTGGCTTTTATCAATAACCACGACAACCAGAGAGGACATGGTGGTGGCGGTAGCATT
GTCACATTCAAAGATCCATATGATTTGAAGATCCTGACTGCTTACATGTTGGCCTGGCCA
TACGGAGTACCAAGAGTGATGTCTAGTTACTACTTTGAAGATCCGGATCAAGGACCCCCA
TCCAGTCAACGTGGCGTAAGCGAAGACGGTTCATGTACGAATGGATGGGTATGTGAGCAT
AGATGGCGACAGATAAGGAATATGTTTGGATTTGCCACCGCAGTCATAGGCACCTCCATG
AATGACTGGTGGACCAACGGGAACAACCAGATTGCTTTCGCTCGCGGAAACAAGGGATTT
ATTGCTATAAATGGTGCTGGATATGACATGTCAGAGAATCTACAAACTGGATTACCGCAA
GGAACCTACTGCAATGTAATTGATGGTGATTATACCGCAGGAGGTTGCGGCGGTGAATGT
ATAGCGGTCGATTCCAATGGCAATGCAAACATATTTATCTCTGGAGGCAGCTCTGATCCG
ATAGTCGCAATACATGCCAACGCACAATCAGACTCATGCAACACTGGTGAAACTGGGGGA
GGTGGCACTGGCACTGGCACCGGTACTGGTACAGGAGGTGGTGATACTGCTTGTACCGAC
TGCACGTGCAACGACAAATACGAATGCGGGTATCTCGGAATAGACGGTCCCGAATGCGAA
ACACAAGGATGTCTGTGGTGTCCGACGAATGATGGCAGTAGTGATCCATGGTGT
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[22-391] 1.88E-88 |
| SMART |
Glyco_hydro_13_cat_dom (IPR006047) - T[27-392] 5.0E-71 |
| PRINTS |
Alpha_amylase (IPR006046) - T[72-89] 5.0E-30 - T[104-115] 5.0E-30 - T[205-216] 5.0E-30 - T[243-261] 5.0E-30 - T[299-311] 5.0E-30 |
| Pfam |
Glyco_hydro_13_cat_dom (IPR006047) - T[88-314] 7.2E-11 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[398-490] 6.8E-34 |
| SMART |
A-amylase_C (IPR031319) - T[401-489] 4.8E-39 |
| Pfam |
A-amylase/branching_C (IPR006048) - T[404-485] 1.7E-14 |
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[516-558] 11.576 |
| CDD |
P_trefoil_dom (IPR000519) - T[524-558] 3.044E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AMYP_HUMAN | 51.852 % | 498 | 6.38E-173 |
| AMY1_HUMAN | 52.047 % | 503 | 9.36E-175 |
| AMY2B_HUMAN | 51.852 % | 498 | 6.04E-173 |